RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SLU7O95391 586 aaKnown RBP13.55□□□□□ -0.24
COL27A1-202ENST00000451716 GYPCP04921 128 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 PDE6BP35913 854 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 TCP11X2Q5H9J9 407 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 CTAGE1Q96RT6 745 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 WDR24Q96S15 920 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 IRX2Q9BZI1 471 aaPredicted RBP13.55□□□□□ -0.24
COL27A1-202ENST00000451716 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 LAD1O00515 517 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 ZSCAN12O43309 604 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 PRPHP41219 470 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 TNNI2P48788 182 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 ADCY7P51828 1080 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 ZNF543Q08ER8 600 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 RAD9BQ6WBX8 426 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
COL27A1-202ENST00000451716 MMTAG2Q9BU76 263 aaKnown RBP13.55□□□□□ -0.24
COL27A1-202ENST00000451716 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 ERICH4A6NGS2 130 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 CCP110O43303 1012 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 URI1O94763 535 aaPredicted RBP13.54□□□□□ -0.24
COL27A1-202ENST00000451716 CHRNA5P30532 468 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 COPB1P53618 953 aaKnown RBP13.54□□□□□ -0.24
COL27A1-202ENST00000451716 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
COL27A1-202ENST00000451716 DDTLA6NHG4 134 aaPredicted RBP13.54□□□□□ -0.24
COL27A1-202ENST00000451716 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 FCER1AP12319 257 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 GNG11P61952 73 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 C2CD5Q86YS7 1000 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 L2HGDHQ9H9P8 463 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 LIMA1Q9UHB6 759 aaKnown RBP13.54□□□□□ -0.24
COL27A1-202ENST00000451716 PLIN4Q96Q06 1357 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 POTEMA6NI47 508 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 HLA-DOAP06340 250 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 SMARCA1P28370 1054 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 NOP2P46087 812 aaKnown RBP13.54□□□□□ -0.24
COL27A1-202ENST00000451716 ASIC1P78348 528 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 CALCRLQ16602 461 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 HHIPL2Q6UWX4 724 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 SRRTQ9BXP5 876 aaKnown RBP13.54□□□□□ -0.24
COL27A1-202ENST00000451716 LZTFL1Q9NQ48 299 aa13.54□□□□□ -0.24
COL27A1-202ENST00000451716 MFAP3LO75121 409 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 UBXN1Q04323 297 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 STK4Q13043 487 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 FCHSD1Q86WN1 690 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 ERO1AQ96HE7 468 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 TRIM9Q9C026 710 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 PDE4DQ08499 809 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 PANX2Q96RD6 677 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 NUDT12Q9BQG2 462 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 SWAP70Q9UH65 585 aa13.53□□□□□ -0.24
COL27A1-202ENST00000451716 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
COL27A1-202ENST00000451716 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.24
COL27A1-202ENST00000451716 RHOBTB3O94955 611 aa13.52□□□□□ -0.24
COL27A1-202ENST00000451716 SNAP25P60880 206 aa13.52□□□□□ -0.24
COL27A1-202ENST00000451716 SYCP1Q15431 976 aa13.52□□□□□ -0.24
COL27A1-202ENST00000451716 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.24
COL27A1-202ENST00000451716 SGSM3Q96HU1 749 aa13.52□□□□□ -0.24
COL27A1-202ENST00000451716 AK8Q96MA6 479 aa13.52□□□□□ -0.24
COL27A1-202ENST00000451716 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.24
COL27A1-202ENST00000451716 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.24
COL27A1-202ENST00000451716 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.243e-7■□□□□ 10.5
COL27A1-202ENST00000451716 MYH8P13535 1937 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 COL11A2P13942 1736 aaPredicted RBP13.52□□□□□ -0.25
COL27A1-202ENST00000451716 ESYT2A0FGR8 921 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 PLSCR1O15162 318 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.255e-6■■■□□ 17
COL27A1-202ENST00000451716 ECE2O60344 883 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 DYMQ7RTS9 669 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 MTMR9Q96QG7 549 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 PHLPP2Q6ZVD8 1323 aa13.52□□□□□ -0.25
COL27A1-202ENST00000451716 H7C1D1 291 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 MCM6Q14566 821 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 KCNB1Q14721 858 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 AOC3Q16853 763 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 PODNQ7Z5L7 613 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 ANKRD20A12PQ8NF67 263 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 FAM198AQ9UFP1 575 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 PSMA7O14818 248 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 GDF11O95390 407 aa13.51□□□□□ -0.25
COL27A1-202ENST00000451716 EEF2P13639 858 aaKnown RBP13.51□□□□□ -0.25
COL27A1-202ENST00000451716 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms