RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CAP2P40123 477 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 TXKP42681 527 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 USP11P51784 963 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 TRAF1Q13077 416 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 PDIA5Q14554 519 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-202ENST00000439724 LRRC15Q8TF66 581 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 CALML4Q96GE6 196 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 ANO3Q9BYT9 981 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 STK17AQ9UEE5 414 aa13.27□□□□□ -0.29
SMAD3-202ENST00000439724 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.29
SMAD3-202ENST00000439724 MEIS2O14770 477 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 KLRC4O43908 158 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 PLA2G6O60733 806 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 ECE1P42892 770 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 STAT2P52630 851 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 CCZ1BP86790 482 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 CCZ1P86791 482 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-202ENST00000439724 IKQ13123 557 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-202ENST00000439724 ARID5BQ14865 1188 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 CDKAL1Q5VV42 579 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 VSTM4Q8IW00 320 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 ACER1Q8TDN7 264 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 CRYGNQ8WXF5 182 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 NAP1L5Q96NT1 182 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-202ENST00000439724 SH2D4AQ9H788 454 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 LRWD1Q9UFC0 647 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 RWDD2AQ9UIY3 292 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
SMAD3-202ENST00000439724 CYP3A7-CYP3A51PA0A087WV96 503 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 SLC26A4O43511 780 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 RHOBTB3O94955 611 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 FOSP01100 380 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-202ENST00000439724 CDK11BP21127 795 aaKnown RBP13.25□□□□□ -0.29
SMAD3-202ENST00000439724 CYP3A7P24462 503 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 TERF1P54274 439 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 GRB10Q13322 594 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 TNFAIP1Q13829 316 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 KLHL10Q6JEL2 608 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 USP17L6PQ6QN14 398 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-202ENST00000439724 C7orf25Q9BPX7 421 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
SMAD3-202ENST00000439724 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 SAMSN1Q9NSI8 373 aaKnown RBP13.25□□□□□ -0.29
SMAD3-202ENST00000439724 INTS13Q9NVM9 706 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 CTNND2Q9UQB3 1225 aa13.25□□□□□ -0.29
SMAD3-202ENST00000439724 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 ASNSP08243 561 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 SKILP12757 684 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 AMPD3Q01432 767 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 PAK1Q13153 545 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 KMT5BQ4FZB7 885 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 KIAA1755Q5JYT7 1200 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 SPICE1Q8N0Z3 855 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 HAS1Q92839 578 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 PLIN2Q99541 437 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 BCS1LQ9Y276 419 aa13.24□□□□□ -0.29
SMAD3-202ENST00000439724 A0A1B0GTH6 734 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 FZD9O00144 591 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 PIK3CDO00329 1044 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMAD3-202ENST00000439724 SREBF1P36956 1147 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 KCNJ6P48051 423 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 STX17P56962 302 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 SNAP25P60880 206 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 RASA3Q14644 834 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 R3HDM1Q15032 1099 aaKnown RBP13.23□□□□□ -0.29
SMAD3-202ENST00000439724 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 FAM83BQ5T0W9 1011 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 MIGA2Q7L4E1 593 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 APTXQ7Z2E3 356 aaKnown RBP13.23□□□□□ -0.29
SMAD3-202ENST00000439724 FAM160B2Q86V87 743 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 CCDC47Q96A33 483 aaKnown RBP13.23□□□□□ -0.29
SMAD3-202ENST00000439724 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 KCNMB3Q9NPA1 279 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 KCND1Q9NSA2 647 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 GDAQ9Y2T3 454 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 POTEMA6NI47 508 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 OPLAHO14841 1288 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 TBX3O15119 743 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 PPP1R2P41236 205 aa13.23□□□□□ -0.29
SMAD3-202ENST00000439724 PRCPP42785 496 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms