RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SEL1L2Q5TEA6 688 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 CCDC91Q7Z6B0 441 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 HOOK3Q86VS8 718 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 ELOA2Q8IYF1 753 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 NDST4Q9H3R1 872 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 RIC8AQ9NPQ8 531 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 SWAP70Q9UH65 585 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 CCNL1Q9UK58 526 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-205ENST00000438362 FAM184BQ9ULE4 1060 aa7.38□□□□□ -1.23
CSDE1-205ENST00000438362 FRMPD2Q68DX3 1309 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 ANO9A1A5B4 782 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 FAM205CA6NFA0 338 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 CXCR5P32302 372 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 CTNNA1P35221 906 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 KIF11P52732 1056 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PPARDQ03181 441 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PLS1Q14651 629 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 KCTD16Q68DU8 428 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 RAD9BQ6WBX8 426 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 RASGRP2Q7LDG7 609 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 SH3GLB2Q9NR46 395 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 RNF14Q9UBS8 474 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 STK24Q9Y6E0 443 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 A0A1W2PRG0 241 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 SRGAP2O75044 1071 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PPFIA4O75335 1185 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 HEXIM1O94992 359 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 GCNT3O95395 438 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 MOCS3O95396 460 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 CYP19A1P11511 503 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 CTNNA2P26232 953 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 STAT1P42224 750 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 NT5C2P49902 561 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 FXR1P51114 621 aaKnown RBP eCLIP7.37□□□□□ -1.231e-6■■■□□ 18.2
CSDE1-205ENST00000438362 GRIN1Q05586 938 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 ADAM9Q13443 819 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PPP1R7Q15435 360 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 ERFEQ4G0M1 354 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 SPATS2Q86XZ4 545 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 FBXL16Q8N461 479 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 DDX12PQ92771 950 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 ZNF622Q969S3 477 aaKnown RBP eCLIP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 RBM17Q96I25 401 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 SCLT1Q96NL6 688 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PSTPIP2Q9H939 334 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PPANQ9NQ55 473 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 LIMA1Q9UHB6 759 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 ATP6V0A2Q9Y487 856 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PCDHB13Q9Y5F0 798 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 PCDHA13Q9Y5I0 950 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 KRIT1O00522 736 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 SPOPO43791 374 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 VIMP08670 466 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 H2AFZP0C0S5 128 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 BTDP43251 543 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 VSNL1P62760 191 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 LRRC41Q15345 812 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 H2AFVQ71UI9 128 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 LRRC47Q8N1G4 583 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 DYNLL2Q96FJ2 89 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 KRT12Q99456 494 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 EPB41L5Q9HCM4 733 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 EPB41L4AQ9HCS5 686 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 BSDC1Q9NW68 430 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 DDX25Q9UHL0 483 aaKnown RBP7.37□□□□□ -1.23
CSDE1-205ENST00000438362 AMFRQ9UKV5 643 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 CAPN7Q9Y6W3 813 aa7.37□□□□□ -1.23
CSDE1-205ENST00000438362 IRX3P78415 501 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 DPYDQ12882 1025 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 COL9A3Q14050 684 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 ILDR1Q86SU0 546 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 EFCAB13Q8IY85 973 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 UBL4BQ8N7F7 174 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 SMCR8Q8TEV9 937 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 U2AF1L4Q8WU68 220 aaKnown RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 A0A1W2PQC6 194 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 ZBTB22O15209 634 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 CHMP2AO43633 222 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 USP14P54578 494 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 TTC19Q6DKK2 380 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 USP17L1Q7RTZ2 530 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 CROCCP2Q86T23 111 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 PLCD3Q8N3E9 789 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 MYCT1Q8N699 235 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 BICD1Q96G01 975 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 RAB17Q9H0T7 212 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 CTTNBP2NLQ9P2B4 639 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 TNS3Q68CZ2 1445 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 ITIH6Q6UXX5 1313 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 SALL1Q9NSC2 1324 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 C1orf167Q5SNV9 1468 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 PXDNQ92626 1479 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 A0A087WUV0 522 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 NMT2O60551 498 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 CYP2D6P10635 497 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 CASP7P55210 303 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms