RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 FAM109BQ6ICB4 259 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-202ENST00000430200 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
HDAC4-202ENST00000430200 PPP1R13LQ8WUF5 828 aa13.84□□□□□ -0.19
HDAC4-202ENST00000430200 TBC1D5Q92609 795 aa13.84□□□□□ -0.19
HDAC4-202ENST00000430200 FAM161BQ96MY7 647 aa13.84□□□□□ -0.19
HDAC4-202ENST00000430200 ZSCAN10Q96SZ4 725 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-202ENST00000430200 RNF41Q9H4P4 317 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-202ENST00000430200 PRKAG2Q9UGJ0 569 aa13.84□□□□□ -0.19
HDAC4-202ENST00000430200 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 ASB14A6NK59 587 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 OPLAHO14841 1288 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 PPP1R11O60927 126 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-202ENST00000430200 CYP21A2P08686 494 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 EDNRBP24530 442 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 CHMLP26374 656 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 CALML3P27482 149 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 PSMC6P62333 389 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 RPS6P62753 249 aaKnown RBP13.83□□□□□ -0.2
HDAC4-202ENST00000430200 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-202ENST00000430200 GNASQ5JWF2 1037 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 DGKHQ86XP1 1220 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 ANKS1AQ92625 1134 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 TTC14Q96N46 770 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 ELP1O95163 1332 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 RAD50Q92878 1312 aa13.83□□□□□ -0.2
HDAC4-202ENST00000430200 COL4A4P53420 1690 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-202ENST00000430200 ARIH2O95376 493 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 CD4P01730 458 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 FSCN1Q16658 493 aaKnown RBP13.82□□□□□ -0.2
HDAC4-202ENST00000430200 C16orf59Q7L2K0 433 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 ADGRF4Q8IZF3 695 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 SLC43A3Q8NBI5 491 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 COPS5Q92905 334 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 VWCEQ96DN2 955 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 TOX2Q96NM4 488 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 TTYH1Q9H313 450 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-202ENST00000430200 VTA1Q9NP79 307 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 TMEM39AQ9NV64 488 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 SIP14410 1827 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 MUC3AQ02505 3323 aa13.82□□□□□ -0.2
HDAC4-202ENST00000430200 XIRP2A4UGR9 3374 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 A0A0U1RQG5 324 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-202ENST00000430200 ARVCFO00192 962 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 HIP1O00291 1037 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 DYNC1LI2O43237 492 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-202ENST00000430200 RAG1P15918 1043 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 IMMTQ16891 758 aaKnown RBP13.81□□□□□ -0.2
HDAC4-202ENST00000430200 QRICH1Q2TAL8 776 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 PCSK9Q8NBP7 692 aaKnown RBP13.81□□□□□ -0.2
HDAC4-202ENST00000430200 PPP1R12CQ9BZL4 782 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 JMJD4Q9H9V9 463 aa13.81□□□□□ -0.2
HDAC4-202ENST00000430200 RBM47A0AV96 593 aaKnown RBP13.8□□□□□ -0.2
HDAC4-202ENST00000430200 ANTXR2P58335 489 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 FPGSQ05932 587 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 DUSP28Q4G0W2 176 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
HDAC4-202ENST00000430200 KIAA1211Q6ZU35 1233 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
HDAC4-202ENST00000430200 IQCA1Q86XH1 822 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.8□□□□□ -0.29e-6■■■■■ 27.7
HDAC4-202ENST00000430200 TRPV6Q9H1D0 765 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 KAT14Q9H8E8 782 aa13.8□□□□□ -0.2
HDAC4-202ENST00000430200 DCDC2CA8MYV0 355 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 SGSM2O43147 1006 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 B4GALT4O60513 344 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 TIMP1P01033 207 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 CSF2RAP15509 400 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 CYP2C18P33260 490 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 ASPRV1Q53RT3 343 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 CHST3Q7LGC8 479 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 SYTL5Q8TDW5 730 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-202ENST00000430200 RNPC3Q96LT9 517 aaKnown RBP13.79□□□□□ -0.2
HDAC4-202ENST00000430200 WDR11Q9BZH6 1224 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-202ENST00000430200 MAD2L2Q9UI95 211 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
HDAC4-202ENST00000430200 ACRP10323 421 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 PURAQ00577 322 aaKnown RBP13.78□□□□□ -0.2
HDAC4-202ENST00000430200 ITGA7Q13683 1181 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 IQSEC1Q6DN90 963 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 MFSD5Q6N075 450 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 TAAR1Q96RJ0 339 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 KRT23Q9C075 422 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 SPC25Q9HBM1 224 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 ADD3Q9UEY8 706 aaKnown RBP13.78□□□□□ -0.2
HDAC4-202ENST00000430200 MYO9BQ13459 2157 aa13.78□□□□□ -0.2
HDAC4-202ENST00000430200 GRXCR1A8MXD5 290 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 E7EWF7 191 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 CYTH3O43739 400 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 ABCB11O95342 1321 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 PARP1P09874 1014 aaKnown RBP13.77□□□□□ -0.21
HDAC4-202ENST00000430200 TMEM240Q5SV17 173 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 IFIT1BQ5T764 474 aaKnown RBP13.77□□□□□ -0.21
HDAC4-202ENST00000430200 RASIP1Q5U651 963 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms