RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CEP128Q6ZU80 1094 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 ZNF365Q70YC5 407 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 EXOC3L1Q86VI1 746 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 USHBP1Q8N6Y0 703 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 WHAMMQ8TF30 809 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 TRAIPQ9BWF2 469 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 DAAM1Q9Y4D1 1078 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 ABL1P00519 1130 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 A1BGP04217 495 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 ALOX15P16050 662 aaPredicted RBP9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 VAV2P52735 878 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 ZNF131P52739 623 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 ATP11AP98196 1134 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 RBL2Q08999 1139 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 RNF220Q5VTB9 566 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 CPLX4Q7Z7G2 160 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 STAG2Q8N3U4 1231 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 CAGE1Q8TC20 777 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 PTPRN2Q92932 1015 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 RPS6KC1Q96S38 1066 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 SLF1Q9BQI6 1058 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 ATP8A2Q9NTI2 1148 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 STIM2Q9P246 746 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 ABCF2Q9UG63 623 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 RBM8AQ9Y5S9 174 aaKnown RBP9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 LMO7Q8WWI1 1683 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 ZMYM6O95789 1325 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 ORC4O43929 436 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 HIP1RO75146 1068 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 ATP1A1P05023 1023 aaKnown RBP9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 GNAZP19086 355 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 DRD4P21917 467 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 GSTT1P30711 240 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 CASP14P31944 242 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 PBX1P40424 430 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 ALDH5A1P51649 535 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 HDAC4P56524 1084 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 LACTBP83111 547 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 LRIG3Q6UXM1 1119 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 CYP26C1Q6V0L0 522 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 TMBIM4Q9HC24 238 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 DMGDHQ9UI17 866 aaKnown RBP9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 USP42Q9H9J4 1324 aaKnown RBP9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 SLC27A2O14975 620 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 ASAP2O43150 1006 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 FLIIQ13045 1269 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 BIRC3Q13489 604 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 STK38Q15208 465 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 TRIM68Q6AZZ1 485 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 ANKLE2Q86XL3 938 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 SLC15A3Q8IY34 581 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 SPICE1Q8N0Z3 855 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 FNBP4Q8N3X1 1017 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 IP6K1Q92551 441 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 TIPINQ9BVW5 301 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 SNRKQ9NRH2 765 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 ADAM22Q9P0K1 906 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 DLGAP2Q9P1A6 1054 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 DACH1Q9UI36 760 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 SCOCQ9UIL1 159 aa9.76□□□□□ -0.85
CDC42BPA-206ENST00000429440 JCADQ9P266 1359 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 ITIH6Q6UXX5 1313 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 GBP1P32455 592 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 RFC5P40937 340 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 SLC4A10Q6U841 1118 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 STKLD1Q8NE28 680 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 RAPGEF5Q92565 580 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 BHMTQ93088 406 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 CENPTQ96BT3 561 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 CCDC43Q96MW1 224 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 HAPLN3Q96S86 360 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 SMC6Q96SB8 1091 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 CCDC28BQ9BUN5 200 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 RMND1Q9NWS8 449 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 HMG20BQ9P0W2 317 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 NFE2L3Q9Y4A8 694 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 NCAPD2Q15021 1401 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 TRPM3Q9HCF6 1732 aaPredicted RBP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 AFF2P51816 1311 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 F8W031 263 aaPredicted RBP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 PDE2AO00408 941 aaPredicted RBP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 SPTLC2O15270 562 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 PRPF3O43395 683 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 TROVE2P10155 538 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 PFKFB1P16118 471 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 SMARCA1P28370 1054 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 USP46P62068 366 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 STK3Q13188 491 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 RUFY4Q6ZNE9 571 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 IRGQQ8WZA9 623 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 AIDAQ96BJ3 306 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 CAPZA3Q96KX2 299 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 LRRC1Q9BTT6 524 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 ARHGEF10LQ9HCE6 1279 aa9.75□□□□□ -0.85
CDC42BPA-206ENST00000429440 CTTNBP2NLQ9P2B4 639 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms