RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 NR5A1Q13285 461 aa18.89■□□□□ 0.62
SMARCA4-203ENST00000429416 RCSD1Q6JBY9 416 aa18.89■□□□□ 0.62
SMARCA4-203ENST00000429416 CLSTN2Q9H4D0 955 aa18.89■□□□□ 0.62
SMARCA4-203ENST00000429416 CTR9Q6PD62 1173 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 SYMPKQ92797 1274 aaKnown RBP18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USTQ9Y2C2 406 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 CD2APQ9Y5K6 639 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L15C9J2P7 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L13C9JLJ4 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L11C9JVI0 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L18D6R9N7 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L22D6RA61 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L17D6RBQ6 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L19D6RCP7 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L20D6RJB6 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 TGFB2P61812 414 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L24Q0WX57 530 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 PLA2G12BQ9BX93 195 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 UQCRHLA0A096LP55 91 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 ZBBXA8MT70 800 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 UQCRHP07919 91 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 YWHAEP62258 255 aaKnown RBP18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 TMED8Q6PL24 325 aaPredicted RBP18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 LEKR1Q6ZMV7 388 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 DEFB129Q9H1M3 183 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 SRGAP2CP0DJJ0 459 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 NLRP4Q96MN2 994 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 DNAI1Q9UI46 699 aa18.89■□□□□ 0.61
SMARCA4-203ENST00000429416 AKR1B1P15121 316 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 FAM26FQ5R3K3 315 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 KMT5AQ9NQR1 393 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 TLR3O15455 904 aaKnown RBP18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 SNAPC2Q13487 334 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 TBC1D10CQ8IV04 446 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 STAG1Q8WVM7 1258 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 ARPP19P56211 112 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 RASSF7Q02833 373 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 ADALQ6DHV7 355 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 ZBTB5O15062 677 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 LONP1P36776 959 aaKnown RBP18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 KMT5BQ4FZB7 885 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 CCDC114Q96M63 670 aa18.88■□□□□ 0.61
SMARCA4-203ENST00000429416 AKR1B15C9JRZ8 316 aaPredicted RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 LIFRP42702 1097 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 NSUN4Q96CB9 384 aaKnown RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 XPOTO43592 962 aaKnown RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 OSTNP61366 133 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 EXOC8Q8IYI6 725 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 GOLGA5Q8TBA6 731 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 NSUN6Q8TEA1 469 aaKnown RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 NACC1Q96RE7 527 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 ZMYND15Q9H091 742 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 NLRC4Q9NPP4 1024 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 FAM207AQ9NSI2 230 aaPredicted RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 RASAL2Q9UJF2 1139 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 ATG9AQ7Z3C6 839 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 MAATS1Q7Z4T9 603 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 CLIC4Q9Y696 253 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 IFNAR1P17181 557 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 TMEM39BQ9GZU3 492 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 FOXP1Q9H334 677 aaPredicted RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 GADD45BO75293 160 aaPredicted RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 CAPZA3Q96KX2 299 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 OSBPL5Q9H0X9 879 aaPredicted RBP18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 KCNH4Q9UQ05 1017 aa18.87■□□□□ 0.61
SMARCA4-203ENST00000429416 NEDD4P46934 1319 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 CAPN9O14815 690 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 PRPF3O43395 683 aaKnown RBP18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 RPS12P25398 132 aaKnown RBP18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 MTMR1Q13613 665 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 ZFYVE28Q9HCC9 887 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 PRDM5Q9NQX1 630 aaPredicted RBP18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 TTLL3Q9Y4R7 772 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 CDC42EP5Q6NZY7 148 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 USP17L6PQ6QN14 398 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 IPO4Q8TEX9 1081 aaKnown RBP18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 ARMCX3Q9UH62 379 aaPredicted RBP18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 ACAD9Q9H845 621 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 C1orf112Q9NSG2 853 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 CCL15-CCL14A0A0B4J2E2 113 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 CDC25AP30304 524 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 NLRP12P59046 1061 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 CCL15Q16663 113 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 EEF2KMTQ96G04 330 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 CTTNBP2NLQ9P2B4 639 aa18.86■□□□□ 0.61
SMARCA4-203ENST00000429416 NSUN7Q8NE18 718 aaKnown RBP18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 HESX1Q9UBX0 185 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 ATP2A1O14983 1001 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 LARP4BQ92615 738 aaKnown RBP18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 CKAP4Q07065 602 aaKnown RBP18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 BIRC2Q13490 618 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 ZNF827Q17R98 1081 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 CCDC122Q5T0U0 273 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 ZBTB33Q86T24 672 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 TRAPPC10P48553 1259 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 PPP1R14CQ8TAE6 165 aa18.85■□□□□ 0.61
SMARCA4-203ENST00000429416 TTLL4Q14679 1199 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms