RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 CABP7Q86V35 215 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 IRF2BP1Q8IU81 584 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 GOLGA1Q92805 767 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 EHD4Q9H223 541 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 FAM204AQ9H8W3 233 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 SMARCAL1Q9NZC9 954 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 STXBP3O00186 592 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 GTPBP6O43824 516 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-204ENST00000423698 ORC4O43929 436 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 DNAAF5Q86Y56 855 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 TRIML1Q8N9V2 468 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 NOA1Q8NC60 698 aaKnown RBP13.15□□□□□ -0.3
ERCC1-204ENST00000423698 MYH8P13535 1937 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 ZNF185O15231 689 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
ERCC1-204ENST00000423698 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-204ENST00000423698 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 ANKRD20A12PQ8NF67 263 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 CD209Q9NNX6 404 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
ERCC1-204ENST00000423698 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-204ENST00000423698 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.3
ERCC1-204ENST00000423698 G3V3G9 751 aa13.15□□□□□ -0.31
ERCC1-204ENST00000423698 IRF6O14896 467 aa13.15□□□□□ -0.31
ERCC1-204ENST00000423698 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.31
ERCC1-204ENST00000423698 ANKRD40Q6AI12 368 aa13.15□□□□□ -0.31
ERCC1-204ENST00000423698 CRACR2AQ9BSW2 395 aa13.15□□□□□ -0.31
ERCC1-204ENST00000423698 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.31
ERCC1-204ENST00000423698 CXCR5P32302 372 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
ERCC1-204ENST00000423698 PRR5LQ6MZQ0 368 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 KIAA1328Q86T90 577 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 TCP11L1Q9NUJ3 509 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 CACNA1SQ13698 1873 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 SLC37A4O43826 429 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 IVLP07476 585 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 VSNL1P62760 191 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 ZSCAN29Q8IWY8 852 aaPredicted RBP13.14□□□□□ -0.31
ERCC1-204ENST00000423698 NELFCDQ8IXH7 590 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 EXOC1Q9NV70 894 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
ERCC1-204ENST00000423698 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
ERCC1-204ENST00000423698 DUOX1Q9NRD9 1551 aa13.14□□□□□ -0.31
ERCC1-204ENST00000423698 CTAGE9A4FU28 777 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 AKR1B1P15121 316 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 CALML3P27482 149 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 RSRC2Q7L4I2 434 aaKnown RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 KAT2BQ92831 832 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 MMRN2Q9H8L6 949 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 NPHP3-ACAD11A0A0J9YXS1 232 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 GRAPQ13588 217 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 CCDC122Q5T0U0 273 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 PPM1EQ8WY54 764 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 CXorf56Q9H5V9 222 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 LUC7L2Q9Y383 392 aaKnown RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 RCCD1A6NED2 376 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 BEND6Q5SZJ8 279 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-204ENST00000423698 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 BARHL2Q9NY43 387 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 RWDD2AQ9UIY3 292 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
ERCC1-204ENST00000423698 TRIM37O94972 964 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 GRM4Q14833 912 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 TMC4Q7Z404 712 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 RABGGTAQ92696 567 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 CTAGE1Q96RT6 745 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 NOC4LQ9BVI4 516 aaKnown RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 LACRTQ9GZZ8 138 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 FLT1P17948 1338 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 LRRIQ3A6PVS8 624 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L11C9JVI0 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L18D6R9N7 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L22D6RA61 530 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms