RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LRRC41Q15345 812 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 ZYXQ15942 572 aaKnown RBP12.28□□□□□ -0.44
DDX56-203ENST00000421223 CNPY4Q8N129 248 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 CCSER1Q9C0I3 900 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 DNAJC18Q9H819 358 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 KCND1Q9NSA2 647 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 SWAP70Q9UH65 585 aa12.28□□□□□ -0.44
DDX56-203ENST00000421223 CASQ1P31415 396 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 MTIF2P46199 727 aaKnown RBP12.27□□□□□ -0.44
DDX56-203ENST00000421223 SYCP1Q15431 976 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 RAD9BQ6WBX8 426 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 SV2BQ7L1I2 683 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 ADSSL1Q8N142 457 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 ACRBPQ8NEB7 543 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 CUL5Q93034 780 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 CARD6Q9BX69 1037 aa12.27□□□□□ -0.44
DDX56-203ENST00000421223 MRPL44Q9H9J2 332 aaKnown RBP12.27□□□□□ -0.44
DDX56-203ENST00000421223 B4DLN1 442 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 GYPCP04921 128 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 MRPL12P52815 198 aaKnown RBP12.27□□□□□ -0.45
DDX56-203ENST00000421223 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
DDX56-203ENST00000421223 ICA1Q05084 483 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 DDX25Q9UHL0 483 aaKnown RBP12.27□□□□□ -0.45
DDX56-203ENST00000421223 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 LAD1O00515 517 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 CCDC175P0C221 793 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 EZH2Q15910 746 aaKnown RBP12.27□□□□□ -0.45
DDX56-203ENST00000421223 QRICH1Q2TAL8 776 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 KRT79Q5XKE5 535 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 PRMT6Q96LA8 375 aaPredicted RBP12.27□□□□□ -0.45
DDX56-203ENST00000421223 EPC1Q9H2F5 836 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 POLD4Q9HCU8 107 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 KBTBD4Q9NVX7 518 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 SUGT1Q9Y2Z0 365 aa12.27□□□□□ -0.45
DDX56-203ENST00000421223 LAMB1P07942 1786 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 ZBTB5O15062 677 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 KLRC4O43908 158 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 GH2P01242 217 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 TRIM65Q6PJ69 517 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 SLF1Q9BQI6 1058 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 MMTAG2Q9BU76 263 aaKnown RBP12.26□□□□□ -0.45
DDX56-203ENST00000421223 VEZTQ9HBM0 779 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
DDX56-203ENST00000421223 NAV1Q8NEY1 1877 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 H7C1D1 291 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 PLSCR1O15162 318 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 IGSF3O75054 1194 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 MFAP3LO75121 409 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 RXRBP28702 533 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 PRPHP41219 470 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 NT5C2P49902 561 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 AMPD3Q01432 767 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 SPAG1Q07617 926 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 DACT2Q5SW24 774 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 ANKRD40Q6AI12 368 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 SH3BP5LQ7L8J4 393 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 CSRNP1Q96S65 589 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 PPP1R1BQ9UD71 204 aaPredicted RBP12.26□□□□□ -0.45
DDX56-203ENST00000421223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDX56-203ENST00000421223 MYH1P12882 1939 aa12.26□□□□□ -0.45
DDX56-203ENST00000421223 FANCGO15287 622 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 ABCB5Q2M3G0 1257 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 TSR1Q2NL82 804 aaKnown RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 ARHGAP29Q52LW3 1261 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 GPATCH4Q5T3I0 446 aaKnown RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 STRIP1Q5VSL9 837 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 FCHSD1Q86WN1 690 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 IRF2BP1Q8IU81 584 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 ERO1AQ96HE7 468 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 AK8Q96MA6 479 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 ZDHHC15Q96MV8 337 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 PCDHA12Q9UN75 941 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 MORC2Q9Y6X9 1032 aaPredicted RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 MYMKA6NI61 221 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 F5H6K3 240 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 HOXA13P31271 388 aaPredicted RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 STAT3P40763 770 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 KLK7P49862 253 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 KLRC3Q07444 240 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 GRB10Q13322 594 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 CDC37Q16543 378 aaPredicted RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 CNGA4Q8IV77 575 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 SMAP1Q8IYB5 467 aaPredicted RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 UBXN4Q92575 508 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
DDX56-203ENST00000421223 CHP1Q99653 195 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 RAB34Q9BZG1 259 aa12.25□□□□□ -0.45
DDX56-203ENST00000421223 NKRFO15226 690 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX56-203ENST00000421223 ABL1P00519 1130 aa12.24□□□□□ -0.45
DDX56-203ENST00000421223 TRIM21P19474 475 aaKnown RBP12.24□□□□□ -0.45
DDX56-203ENST00000421223 TBC1D8BQ0IIM8 1120 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms