RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ZNF830Q96NB3 372 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 PIGSQ96S52 555 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 NAP1L3Q99457 506 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 PSMD14O00487 310 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 ARL1P40616 181 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 MAP2K1Q02750 393 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 SCRN1Q12765 414 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 NUB1Q9Y5A7 615 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 FERP16591 822 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-206ENST00000421141 APOL6Q9BWW8 343 aa11.86□□□□□ -0.51
PTCH1-206ENST00000421141 SEC24BO95487 1268 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CYP4A11Q02928 519 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CEP170P1Q96L14 293 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 STRBPQ96SI9 672 aaKnown RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 E7EVH7 732 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 IGSF3O75054 1194 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 PPP1R14CQ8TAE6 165 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CUEDC2Q9H467 287 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 C1orf112Q9NSG2 853 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 AKR1B15C9JRZ8 316 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CAPN9O14815 690 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 HNRNPDLO14979 420 aaKnown RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 MARK3P27448 753 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 PIK3CAP42336 1068 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 BIRC2Q13490 618 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CFAP58Q5T655 872 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 DGKHQ86XP1 1220 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 NELFCDQ8IXH7 590 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 GGA3Q9NZ52 723 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 IFNKQ9P0W0 207 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 FAM208AQ9UK61 1670 aaKnown RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 SH2B2O14492 632 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CELF2O95319 508 aaKnown RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 TMCO3Q6UWJ1 677 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 RDH13Q8NBN7 331 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 RPAP3Q9H6T3 665 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 JAK3P52333 1124 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 SH3GLB2Q9NR46 395 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 TYW5A2RUC4 315 aaKnown RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 TNPO2O14787 897 aaKnown RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 MTMR1Q13613 665 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 SLC9C1Q4G0N8 1177 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 C9orf131Q5VYM1 1079 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 C7orf31Q8N865 590 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 KIAA1524Q8TCG1 905 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 NUCKS1Q9H1E3 243 aaKnown RBP11.85□□□□□ -0.51
PTCH1-206ENST00000421141 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
PTCH1-206ENST00000421141 SPOPO43791 374 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 GAP43P17677 238 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 AGBL3Q8NEM8 1001 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 TBCKQ8TEA7 893 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 CEP95Q96GE4 821 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 ZBTB5O15062 677 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
PTCH1-206ENST00000421141 VPS16Q9H269 839 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 MEGF6O75095 1541 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 GMPSP49915 693 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-206ENST00000421141 IPO4Q8TEX9 1081 aaKnown RBP11.84□□□□□ -0.51
PTCH1-206ENST00000421141 LPAR1Q92633 364 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 IQCDQ96DY2 449 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 IQCGQ9H095 443 aaKnown RBP11.84□□□□□ -0.51
PTCH1-206ENST00000421141 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
PTCH1-206ENST00000421141 STIM2Q9P246 746 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 DLATP10515 647 aaKnown RBP11.84□□□□□ -0.51
PTCH1-206ENST00000421141 HOXA13P31271 388 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-206ENST00000421141 LIFRP42702 1097 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 GCNAQ96QF7 691 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 ABCB11O95342 1321 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 GABPAQ06546 454 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 PRPF38AQ8NAV1 312 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms