RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PLAAQ9Y263 795 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 MYH2Q9UKX2 1941 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 ESYT3A0FGR9 886 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 ZSCAN5CA6NGD5 496 aaPredicted RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 PES1O00541 588 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 HSPA9P38646 679 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 GUCY2FP51841 1108 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 RIPK1Q13546 671 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 SLMAPQ14BN4 828 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 LRIG3Q6UXM1 1119 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 BZW1Q7L1Q6 419 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 MAATS1Q7Z4T9 603 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 TBC1D31Q96DN5 1066 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 CCDC42Q96M95 316 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 PLCB1Q9NQ66 1216 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 C15orf41Q9Y2V0 281 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 SOS2Q07890 1332 aaPredicted RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 ABCC12Q96J65 1359 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 PPIP5K2O43314 1243 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 BMP15O95972 392 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 MYO1EQ12965 1108 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 GKAP1Q5VSY0 366 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 KRT26Q7Z3Y9 468 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 CCDC26Q8TAB7 109 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 SAAL1Q96ER3 474 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 THAP9Q9H5L6 903 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 SLC39A2Q9NP94 309 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 RNF14Q9UBS8 474 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 BAIAP2L1Q9UHR4 511 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 TRPC6Q9Y210 931 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 GDAQ9Y2T3 454 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 PCDHA13Q9Y5I0 950 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 TRIM49BA6NDI0 452 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 FAM205CA6NFA0 338 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 GCOM1H8Y6P7 765 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 CIAO1O76071 339 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 MYZAPP0CAP1 466 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 CFAP221Q4G0U5 840 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 TLR10Q9BXR5 811 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 EXOC1Q9NV70 894 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 MAPK8IP1Q9UQF2 711 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 CASZ1Q86V15 1759 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 B4DLN1 442 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 RWDD2BP57060 319 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 SCARF1Q14162 830 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 ZNF790Q6PG37 636 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 ADSSL1Q8N142 457 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 CRACR2BQ8N4Y2 399 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 CCHCR1Q8TD31 782 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 MICAL1Q8TDZ2 1067 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 CASKIN2Q8WXE0 1202 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 LRRC59Q96AG4 307 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 THOC1Q96FV9 657 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 SPAG5Q96R06 1193 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 PHF8Q9UPP1 1060 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 ATRNO75882 1429 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 A0A1W2PQJ5 194 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 H7C1W4 665 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 IFIT3O14879 490 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 RPN1P04843 607 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 ZAP70P43403 619 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 TJP1Q07157 1748 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 BIRC3Q13489 604 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 KCNB1Q14721 858 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 RTN1Q16799 776 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 FIGNQ5HY92 759 aa8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 HIBCHQ6NVY1 386 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 PYM1Q9BRP8 204 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-202ENST00000418170 ROBO1Q9Y6N7 1651 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 LCA5LO95447 670 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 CAPRIN2Q6IMN6 1127 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 RAPGEF5Q92565 580 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 DDX17Q92841 729 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 TAF1DQ9H5J8 278 aaPredicted RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 H0YGN5 161 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 NCK2O43639 380 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 ATP2C2O75185 946 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 SMNDC1O75940 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 ANP32DO95626 131 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 PLEKP08567 350 aaPredicted RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 TMOD1P28289 359 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 HNRNPH3P31942 346 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 PEX19P40855 299 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 KLK7P49862 253 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 PMS1P54277 932 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 PPP1R7Q15435 360 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 ACSBG1Q96GR2 724 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 MS4A14Q96JA4 679 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 ZSWIM5Q9P217 1185 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 MAGEC2Q9UBF1 373 aaPredicted RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 TSKSQ9UJT2 592 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 NFS1Q9Y697 457 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 MEGF6O75095 1541 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 ADORA1P30542 326 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 RBBP5Q15291 538 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 MIS18BP1Q6P0N0 1132 aa8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 EIF1ADQ8N9N8 165 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-202ENST00000418170 PARD3BQ8TEW8 1205 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms