RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ACBD3Q9H3P7 528 aa5.53□□□□□ -1.52
HMGB3P20-201ENST00000417997 IMPACTQ9P2X3 320 aa5.53□□□□□ -1.52
HMGB3P20-201ENST00000417997 CNOT6Q9ULM6 557 aaKnown RBP5.53□□□□□ -1.52
HMGB3P20-201ENST00000417997 INPP5FQ9Y2H2 1132 aa5.53□□□□□ -1.52
HMGB3P20-201ENST00000417997 SLC12A7Q9Y666 1083 aa5.53□□□□□ -1.52
HMGB3P20-201ENST00000417997 MIA2Q96PC5 1412 aa5.53□□□□□ -1.52
HMGB3P20-201ENST00000417997 TTC37Q6PGP7 1564 aa5.53□□□□□ -1.52
HMGB3P20-201ENST00000417997 CAMSAP2Q08AD1 1489 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 CDC42BPBQ9Y5S2 1711 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 A0A1W2PQ45 241 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 A0A1W2PQJ5 194 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 A0A1W2PQY0 241 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 NUDT19A8MXV4 375 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 MPOP05164 745 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 NOP2P46087 812 aaKnown RBP5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 GIPRP48546 466 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 SLC7A5Q01650 507 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 POU4F1Q01851 419 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 LAPTM5Q13571 262 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 RAB3GAP1Q15042 981 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 OLFML2BQ68BL8 750 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 LCNL1Q6ZST4 164 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 C1QL4Q86Z23 238 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 OR6P1Q8NGX9 317 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 FGD4Q96M96 766 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 JMJD8Q96S16 334 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 HAUS7Q99871 368 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 GBP3Q9H0R5 595 aa5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 PHAXQ9H814 394 aaKnown RBP5.52□□□□□ -1.53
HMGB3P20-201ENST00000417997 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 A0A1W2PQH9 124 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 PLEKHD1A6NEE1 506 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 IFNGR1P15260 489 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 VIPR1P32241 457 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 FBLN7Q53RD9 439 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 HLA-DQA1Q5Y7H0 255 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 TMEM52Q8NDY8 209 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 RASGRP4Q8TDF6 673 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 ANAPC16Q96DE5 110 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 ARHGAP5Q13017 1502 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 KDM5BQ9UGL1 1544 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 RIMBP3CA6NJZ7 1639 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 RIMBP3BA6NNM3 1639 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 RIMBP3Q9UFD9 1639 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 ABCC10Q5T3U5 1492 aa5.51□□□□□ -1.53
HMGB3P20-201ENST00000417997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 RFXAPO00287 272 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 ABLIM1O14639 778 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 CBFA2T2O43439 604 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 EPHX1P07099 455 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 GJA8P48165 433 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 ERVFRD-1P60508 538 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 DPY19L1Q2PZI1 675 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 TMC6Q7Z403 805 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 TGIF2Q9GZN2 237 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 WHRNQ9P202 907 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 SUGT1Q9Y2Z0 365 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 KCTD3Q9Y597 815 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 SAMD9LQ8IVG5 1584 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 CFAP74Q9C0B2 1584 aa5.5□□□□□ -1.53
HMGB3P20-201ENST00000417997 DAPK1P53355 1430 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 STXBP3O00186 592 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 PPM1BO75688 479 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 EPHB3P54753 998 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 TMEM62Q0P6H9 643 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 SSPNQ14714 243 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 KIAA1211LQ6NV74 962 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 CYP2R1Q6VVX0 501 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 C19orf47Q8N9M1 422 aaKnown RBP5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 SHDQ96IW2 340 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 SEC16BQ96JE7 1060 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 PTCHD1Q96NR3 888 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 FCRL3Q96P31 734 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 GCM1Q9NP62 436 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 MBD1Q9UIS9 605 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 ACSL6Q9UKU0 697 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 DIS3Q9Y2L1 958 aaKnown RBP5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 CCDC9Q9Y3X0 531 aaKnown RBP5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 IRAK3Q9Y616 596 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 ARHGEF5Q12774 1597 aa5.49□□□□□ -1.53
HMGB3P20-201ENST00000417997 AKNAQ7Z591 1439 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 SETD5Q9C0A6 1442 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 GPATCH8Q9UKJ3 1502 aaKnown RBP5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 ABCA9Q8IUA7 1624 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 WDR7Q9Y4E6 1490 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 RAB3GAP2Q9H2M9 1393 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 FGF10O15520 208 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 VAMP4O75379 141 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 TBC1D8O95759 1140 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 MSL3P1P0C860 447 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 PI3P19957 117 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 TACR1P25103 407 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 CEBPAP49715 358 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 YBX1P67809 324 aaKnown RBP5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 MVKQ03426 396 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 ZNF385BQ569K4 471 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms