RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 VPS8Q8N3P4 1428 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 SCAMP3O14828 347 aaKnown RBP6.79□□□□□ -1.32
PTPRK-209ENST00000415046 GSTM1P09488 218 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 CD247P20963 164 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
PTPRK-209ENST00000415046 RAB3GAP1Q15042 981 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 NOL9Q5SY16 702 aaKnown RBP6.79□□□□□ -1.32
PTPRK-209ENST00000415046 CYP2R1Q6VVX0 501 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 TMC6Q7Z403 805 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 MZB1Q8WU39 189 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 KCNC2Q96PR1 638 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 PARD6AQ9NPB6 346 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 ITSN2Q9NZM3 1697 aa6.79□□□□□ -1.32
PTPRK-209ENST00000415046 PLEKHD1A6NEE1 506 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 NUDT19A8MXV4 375 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 FGF10O15520 208 aaPredicted RBP6.78□□□□□ -1.32
PTPRK-209ENST00000415046 HOXA5P20719 270 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 SOX9P48436 509 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 PAK2Q13177 524 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 HLA-DQA1Q5Y7H0 255 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 METTL16Q86W50 562 aaKnown RBP6.78□□□□□ -1.32
PTPRK-209ENST00000415046 ZNF654Q8IZM8 581 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 FIBCD1Q8N539 461 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 PANK1Q8TE04 598 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 BRF1Q92994 677 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 DACT3Q96B18 629 aaPredicted RBP6.78□□□□□ -1.32
PTPRK-209ENST00000415046 SPATA32Q96LK8 384 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 EPB41L4AQ9HCS5 686 aaPredicted RBP6.78□□□□□ -1.32
PTPRK-209ENST00000415046 GINM1Q9NU53 330 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 ZNF451Q9Y4E5 1061 aa6.78□□□□□ -1.32
PTPRK-209ENST00000415046 TROQ12816 1431 aaPredicted RBP6.77□□□□□ -1.33
PTPRK-209ENST00000415046 CD109Q6YHK3 1445 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 EHBP1L1Q8N3D4 1523 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 RICTORQ6R327 1708 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 CBFA2T2O43439 604 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 TRIM13O60858 407 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 TP53P04637 393 aaPredicted RBP6.77□□□□□ -1.33
PTPRK-209ENST00000415046 MSL3P1P0C860 447 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 ITGA4P13612 1032 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 BMP7P18075 431 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 MVKQ03426 396 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 RPTNQ6XPR3 784 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 CCDC81Q6ZN84 652 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 LDHDQ86WU2 507 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 IGDCC3Q8IVU1 814 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 FAM86C1Q9NVL1 165 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 SF3B6Q9Y3B4 125 aaKnown RBP6.77□□□□□ -1.33
PTPRK-209ENST00000415046 TEX14Q8IWB6 1497 aa6.77□□□□□ -1.33
PTPRK-209ENST00000415046 NCANO14594 1321 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 LTBP3Q9NS15 1303 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 A0A087WZG4 1122 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 SRGAP3O43295 1099 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 NOP2P46087 812 aaKnown RBP6.76□□□□□ -1.33
PTPRK-209ENST00000415046 AFF3P51826 1226 aaKnown RBP6.76□□□□□ -1.33
PTPRK-209ENST00000415046 CTSWP56202 376 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 PLEKHN1Q494U1 663 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-209ENST00000415046 TMEFF1Q8IYR6 380 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 C19orf47Q8N9M1 422 aaKnown RBP6.76□□□□□ -1.33
PTPRK-209ENST00000415046 MARCH10Q8NA82 808 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-209ENST00000415046 RASGRP4Q8TDF6 673 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 FCRL3Q96P31 734 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-209ENST00000415046 ZCCHC4Q9H5U6 513 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 CDK11AQ9UQ88 783 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-209ENST00000415046 PCDHA5Q9Y5H7 936 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 SLC12A7Q9Y666 1083 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 ARHGAP5Q13017 1502 aa6.76□□□□□ -1.33
PTPRK-209ENST00000415046 MTUS2Q5JR59 1369 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 CD3EP07766 207 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 IFNGR1P15260 489 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 MAPKAPK2P49137 400 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 NR1I3Q14994 352 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 FAM129CQ86XR2 697 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 JAMLQ86YT9 394 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 CRBNQ96SW2 442 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 HAUS7Q99871 368 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 NOL6Q9H6R4 1146 aaKnown RBP6.75□□□□□ -1.33
PTPRK-209ENST00000415046 EFR3BQ9Y2G0 817 aa6.75□□□□□ -1.33
PTPRK-209ENST00000415046 PRRG2O14669 202 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 GIPRP48546 466 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 CORO7P57737 925 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 POU4F1Q01851 419 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 TCEAL1Q15170 157 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 OR6P1Q8NGX9 317 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 GPRASP2Q96D09 838 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 ZDHHC15Q96MV8 337 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 KLHL25Q9H0H3 589 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 PHAXQ9H814 394 aaKnown RBP6.74□□□□□ -1.33
PTPRK-209ENST00000415046 WHRNQ9P202 907 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 DIS3Q9Y2L1 958 aaKnown RBP6.74□□□□□ -1.33
PTPRK-209ENST00000415046 IRS2Q9Y4H2 1338 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 FRMPD1Q5SYB0 1578 aa6.74□□□□□ -1.33
PTPRK-209ENST00000415046 FANCAO15360 1455 aa6.73□□□□□ -1.33
PTPRK-209ENST00000415046 A0A0G2JLL6 359 aaPredicted RBP6.73□□□□□ -1.33
PTPRK-209ENST00000415046 A0A1W2PQ27 194 aa6.73□□□□□ -1.33
PTPRK-209ENST00000415046 A0A1W2PQ64 194 aa6.73□□□□□ -1.33
PTPRK-209ENST00000415046 A0A1W2PQC6 194 aa6.73□□□□□ -1.33
PTPRK-209ENST00000415046 A0A1W2PQD8 194 aa6.73□□□□□ -1.33
PTPRK-209ENST00000415046 B8ZZF3 427 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms