RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 EFSO43281 561 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 AOC2O75106 756 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 AVPP01185 164 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 DEFB115Q30KQ5 88 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 FIGNL1Q6PIW4 674 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 RIPOR1Q6ZS17 1223 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 NOP9Q86U38 636 aaKnown RBP5.94□□□□□ -1.46
VPS41-205ENST00000414632 DZIP1Q86YF9 867 aaKnown RBP5.94□□□□□ -1.46
VPS41-205ENST00000414632 RELL1Q8IUW5 271 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 APOBEC3FQ8IUX4 373 aaKnown RBP5.94□□□□□ -1.46
VPS41-205ENST00000414632 SPATA5Q8NB90 893 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 TEKT1Q969V4 418 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.94□□□□□ -1.462e-7■■■□□ 15.9
VPS41-205ENST00000414632 CHMP4BQ9H444 224 aaKnown RBP5.94□□□□□ -1.46
VPS41-205ENST00000414632 GBA2Q9HCG7 927 aaPredicted RBP5.94□□□□□ -1.46
VPS41-205ENST00000414632 ZNF70Q9UC06 446 aaPredicted RBP5.94□□□□□ -1.46
VPS41-205ENST00000414632 PCDHGC4Q9Y5F7 938 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 PITPNM2Q9BZ72 1349 aa5.94□□□□□ -1.46
VPS41-205ENST00000414632 SIPA1L1O43166 1804 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 MINDY4BA8MYZ0 360 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 UBE2Q2LH0YL09 131 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 KHNYNO15037 678 aaKnown RBP5.93□□□□□ -1.46
VPS41-205ENST00000414632 MYO1BO43795 1136 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 GFRA3O60609 400 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 FGRP09769 529 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 IFIT2P09913 472 aaKnown RBP5.93□□□□□ -1.46
VPS41-205ENST00000414632 UQCRFS1P1P0C7P4 283 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 FAM157BP0CG42 384 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 RARAP10276 462 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 XRCC5P13010 732 aaKnown RBP5.93□□□□□ -1.46
VPS41-205ENST00000414632 HUNKP57058 714 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 MAP3K10Q02779 954 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 MECOMQ03112 1051 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 TCP10Q12799 353 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 RASA3Q14644 834 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 LAPTM4AQ15012 233 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.93□□□□□ -1.46
VPS41-205ENST00000414632 CCDC158Q5M9N0 1113 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 NBPF12Q5TAG4 269 aaPredicted RBP5.93□□□□□ -1.46
VPS41-205ENST00000414632 TSHZ3Q63HK5 1081 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 APOBEC3HQ6NTF7 200 aaKnown RBP5.93□□□□□ -1.46
VPS41-205ENST00000414632 ERC1Q8IUD2 1116 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 C2orf69Q8N8R5 385 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 ZNF384Q8TF68 577 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 KIF1BPQ96EK5 621 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 CAPNS2Q96L46 248 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 SPON2Q9BUD6 331 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 OXCT2Q9BYC2 517 aaPredicted RBP5.93□□□□□ -1.46
VPS41-205ENST00000414632 TMEM39BQ9GZU3 492 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 DEFB129Q9H1M3 183 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 LIN7BQ9HAP6 207 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 GPR108Q9NPR9 543 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 PIH1D3Q9NQM4 214 aaKnown RBP5.93□□□□□ -1.46
VPS41-205ENST00000414632 RAI14Q9P0K7 980 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 ZFATQ9P243 1243 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 PPM1HQ9ULR3 514 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 DAGLAQ9Y4D2 1042 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 MYH8P13535 1937 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 MAST3O60307 1309 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 SALL1Q9NSC2 1324 aa5.93□□□□□ -1.46
VPS41-205ENST00000414632 BAZ2AQ9UIF9 1905 aaKnown RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 DCDC2BA2VCK2 349 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 RASSF10A6NK89 507 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 NRG2O14511 850 aaPredicted RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 MAN1A2O60476 641 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 RAB11FIP3O75154 756 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 STK10O94804 968 aaKnown RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 THBS1P07996 1170 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 SLURP2P0DP57 97 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 NFKB1P19838 968 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 GBP2P32456 591 aaPredicted RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 TNP2Q05952 138 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 NFIAQ12857 509 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 PWP1Q13610 501 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 LBRQ14739 615 aaKnown RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 GRIN2CQ14957 1233 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 CTC1Q2NKJ3 1217 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 HSP90AB4PQ58FF6 505 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 CDC42EP5Q6NZY7 148 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 DTHD1Q6ZMT9 781 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 SAPCD2Q86UD0 394 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 NCAPG2Q86XI2 1143 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 CLASRPQ8N2M8 674 aaKnown RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 EDC3Q96F86 508 aaKnown RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 ZDHHC15Q96MV8 337 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 TMEM74Q96NL1 305 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 PNMA5Q96PV4 448 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 TCF12Q99081 682 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 OSMRQ99650 979 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 TRIM56Q9BRZ2 755 aaKnown RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 IRX2Q9BZI1 471 aaPredicted RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 LRRCC1Q9C099 1032 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 ANTXR1Q9H6X2 564 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 ABCB6Q9NP58 842 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 LRP2BPQ9P2M1 347 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 ADAMTS1Q9UHI8 967 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 ANGEL1Q9UNK9 670 aaKnown RBP5.92□□□□□ -1.46
VPS41-205ENST00000414632 MROH7-TTC4A0A0A0MT08 1334 aa5.92□□□□□ -1.46
VPS41-205ENST00000414632 WDR33Q9C0J8 1336 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms