RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 EFCAB5A4FU69 1503 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 ZNF202O95125 648 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 CHMLP26374 656 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 ERLEC1Q96DZ1 483 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 TMEM87BQ96K49 555 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 LRRC24Q50LG9 513 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 KMT5AQ9NQR1 393 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 HNRNPCL2B2RXH8 293 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 GNGT2O14610 69 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 HNRNPCL1O60812 293 aaKnown RBP9.19□□□□□ -0.94
SCN9A-203ENST00000409672 NPR1P16066 1061 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 TTC19Q6DKK2 380 aaPredicted RBP9.19□□□□□ -0.94
SCN9A-203ENST00000409672 OTULINQ96BN8 352 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 HEXIM2Q96MH2 286 aaKnown RBP9.19□□□□□ -0.94
SCN9A-203ENST00000409672 VCX3BQ9H321 246 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 LRRC4Q9HBW1 653 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 PFDN6O15212 129 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 MYL5Q02045 173 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 KCNA1Q09470 495 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 ZNF394Q53GI3 561 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 LGSNQ5TDP6 509 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 SECISBP2LQ93073 1101 aaKnown RBP9.19□□□□□ -0.94
SCN9A-203ENST00000409672 CEP170P1Q96L14 293 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 DDIT3P35638 169 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 POLR2FP61218 127 aaKnown RBP9.19□□□□□ -0.94
SCN9A-203ENST00000409672 PNMA1Q8ND90 353 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 SFI1A8K8P3 1242 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 COA7Q96BR5 231 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 ZSCAN10Q96SZ4 725 aaPredicted RBP9.19□□□□□ -0.94
SCN9A-203ENST00000409672 ZNF148Q9UQR1 794 aa9.19□□□□□ -0.94
SCN9A-203ENST00000409672 LOC102724428A0A0B4J2F2 783 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 GOLGA8IPA6NC78 632 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 GOLGA8JA6NMD2 632 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 SIK1P57059 783 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 MESDQ14696 234 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 TTC41PQ6P2S7 1318 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 TEX14Q8IWB6 1497 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 STAT2P52630 851 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 ZNF496Q96IT1 587 aaPredicted RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 SPECC1L-ADORA2AF8WAN1 911 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 LMNB1P20700 586 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 PMLP29590 882 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 TRIM68Q6AZZ1 485 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 ADALQ6DHV7 355 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 PRXQ9BXM0 1461 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 ADORA1P30542 326 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 RPS6KA1Q15418 735 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 OTUD5Q96G74 571 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 FBXL5Q9UKA1 691 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 DOLKQ9UPQ8 538 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 PNMA6EA0A0J9YXQ4 647 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 MAFGO15525 162 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 SERPIND1P05546 499 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 STAT1P42224 750 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 PPFIBP2Q8ND30 876 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 MORC4Q8TE76 937 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 NAPGQ99747 312 aaPredicted RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 SERTAD1Q9UHV2 236 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 ZNF215Q9UL58 517 aaPredicted RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 THOC2Q8NI27 1593 aaKnown RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 EVCP57679 992 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 UBE2SQ16763 222 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 ODR4Q5SWX8 454 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 C17orf53Q8N3J3 647 aaPredicted RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 SUCLA2Q9P2R7 463 aaPredicted RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 PIK3R2O00459 728 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 EBAG9O00559 213 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 RNF8O76064 485 aa9.18□□□□□ -0.94
SCN9A-203ENST00000409672 EIF2AK2P19525 551 aaKnown RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 TWF2Q6IBS0 349 aaKnown RBP9.18□□□□□ -0.94
SCN9A-203ENST00000409672 MAGEA1P43355 309 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 TFDP1Q14186 410 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 RCN2Q14257 317 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 PDXDC2PQ6P474 469 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 FLAD1Q8NFF5 587 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 AMFRQ9UKV5 643 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 URB2Q14146 1524 aaKnown RBP9.17□□□□□ -0.94
SCN9A-203ENST00000409672 SYCP2Q9BX26 1530 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 DNMBPQ6XZF7 1577 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 LRRC41Q15345 812 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 CALN1Q9BXU9 219 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 ANLNQ9NQW6 1124 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 RAD18Q9NS91 495 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 IBTKQ9P2D0 1353 aaPredicted RBP9.17□□□□□ -0.94
SCN9A-203ENST00000409672 FAM196BA6NMK8 535 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 COG7P83436 770 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 E7EWF7 191 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 KCTD6Q8NC69 237 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 USP19O94966 1318 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 FAM95CA0A1B0GW59 222 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 TBC1D12O60347 775 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 SERPINB6P35237 376 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 YWHAGP61981 247 aaKnown RBP eCLIP9.17□□□□□ -0.94
SCN9A-203ENST00000409672 OR6B3Q8NGW1 331 aa9.17□□□□□ -0.94
SCN9A-203ENST00000409672 ARPP21Q9UBL0 812 aaPredicted RBP9.17□□□□□ -0.94
SCN9A-203ENST00000409672 GSTA4O15217 222 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms