RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 NOVP48745 357 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 ALDH5A1P51649 535 aaPredicted RBP14.1□□□□□ -0.15
LINC00544-201ENST00000400540 BAATQ14032 418 aaPredicted RBP14.1□□□□□ -0.15
LINC00544-201ENST00000400540 RAB30Q15771 203 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 IQSEC1Q6DN90 963 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 KIAA1211Q6ZU35 1233 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 TET1Q8NFU7 2136 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 PPP1R13LQ8WUF5 828 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 VTA1Q9NP79 307 aa14.1□□□□□ -0.15
LINC00544-201ENST00000400540 MYH7BA7E2Y1 1941 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 ZEB2O60315 1214 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 IGFBP4P22692 258 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 AKNAD1Q5T1N1 836 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 SLC30A10Q6XR72 485 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 MORC4Q8TE76 937 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 DCAF4Q8WV16 495 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 ALDH8A1Q9H2A2 487 aaPredicted RBP14.09□□□□□ -0.15
LINC00544-201ENST00000400540 TRMT13Q9NUP7 481 aaKnown RBP14.09□□□□□ -0.15
LINC00544-201ENST00000400540 MSRAQ9UJ68 235 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 ANAPC4Q9UJX5 808 aa14.09□□□□□ -0.15
LINC00544-201ENST00000400540 ORC4O43929 436 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 CYP2C9P11712 490 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 DUSP28Q4G0W2 176 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 RRP12Q5JTH9 1297 aaKnown RBP14.08□□□□□ -0.16
LINC00544-201ENST00000400540 SYDE2Q5VT97 1194 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 FAM227BQ96M60 508 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 TMEM47Q9BQJ4 181 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 MTIF3Q9H2K0 278 aaKnown RBP14.08□□□□□ -0.16
LINC00544-201ENST00000400540 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 TOMM22Q9NS69 142 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 THEGQ9P2T0 379 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 Q9Y3F1 56 aa14.08□□□□□ -0.16
LINC00544-201ENST00000400540 A0A0D9SFI3 127 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 PTPDC1A2A3K4 754 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 ZBBXA8MT70 800 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 TNFRSF10AO00220 468 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 MYL3P08590 195 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 FGRP09769 529 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 CALML3P27482 149 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 BTNL9Q6UXG8 535 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 WDR11Q9BZH6 1224 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 TNKSO95271 1327 aa14.07□□□□□ -0.16
LINC00544-201ENST00000400540 PURAQ00577 322 aaKnown RBP14.06□□□□□ -0.16
LINC00544-201ENST00000400540 TTLL4Q14679 1199 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 DEFB128Q7Z7B8 93 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 CLEC4DQ8WXI8 215 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 COPS5Q92905 334 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 ADD3Q9UEY8 706 aaKnown RBP14.06□□□□□ -0.16
LINC00544-201ENST00000400540 SLC4A7Q9Y6M7 1214 aa14.06□□□□□ -0.16
LINC00544-201ENST00000400540 RBM47A0AV96 593 aaKnown RBP14.05□□□□□ -0.16
LINC00544-201ENST00000400540 RBAK-RBAKDNI3L0D1 243 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 FGAP02671 866 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 PDHBP11177 359 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 TOP1P11387 765 aaKnown RBP14.05□□□□□ -0.16
LINC00544-201ENST00000400540 HAND2P61296 217 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 ALX1Q15699 326 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 ANKRD45Q5TZF3 282 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 ZNF589Q86UQ0 364 aaPredicted RBP14.05□□□□□ -0.16
LINC00544-201ENST00000400540 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 ADAMTS19Q8TE59 1207 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 ATXN2LQ8WWM7 1075 aaKnown RBP14.05□□□□□ -0.16
LINC00544-201ENST00000400540 EVI5LQ96CN4 794 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 SEZ6LQ9BYH1 1024 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 HELLSQ9NRZ9 838 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 POLR3EQ9NVU0 708 aa14.05□□□□□ -0.16
LINC00544-201ENST00000400540 PRRC2BQ5JSZ5 2229 aaKnown RBP14.05□□□□□ -0.16
LINC00544-201ENST00000400540 ATP2A2P16615 1042 aaKnown RBP14.04□□□□□ -0.16
LINC00544-201ENST00000400540 CPT1AP50416 773 aa14.04□□□□□ -0.16
LINC00544-201ENST00000400540 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
LINC00544-201ENST00000400540 FAM47CQ5HY64 1035 aa14.04□□□□□ -0.16
LINC00544-201ENST00000400540 RNF207Q6ZRF8 634 aa14.04□□□□□ -0.16
LINC00544-201ENST00000400540 RPUSD2Q8IZ73 545 aaKnown RBP14.04□□□□□ -0.16
LINC00544-201ENST00000400540 MTG1Q9BT17 334 aaPredicted RBP14.04□□□□□ -0.16
LINC00544-201ENST00000400540 CPVLQ9H3G5 476 aa14.04□□□□□ -0.16
LINC00544-201ENST00000400540 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
LINC00544-201ENST00000400540 PCDHA11Q9Y5I1 949 aa14.04□□□□□ -0.16
LINC00544-201ENST00000400540 RFXAPO00287 272 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 ARHGEF15O94989 841 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 ARIH2O95376 493 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 CA3P07451 260 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 HSPD1P10809 573 aaKnown RBP14.03□□□□□ -0.16
LINC00544-201ENST00000400540 EDNRBP24530 442 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 PDE1AP54750 535 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 RPS6P62753 249 aaKnown RBP14.03□□□□□ -0.16
LINC00544-201ENST00000400540 MRPS5P82675 430 aaKnown RBP14.03□□□□□ -0.16
LINC00544-201ENST00000400540 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 NMIQ13287 307 aaPredicted RBP14.03□□□□□ -0.16
LINC00544-201ENST00000400540 PPP2R5BQ15173 497 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 MCMDC2Q4G0Z9 681 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 TBC1D10CQ8IV04 446 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
LINC00544-201ENST00000400540 CERS4Q9HA82 394 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 SIP14410 1827 aa14.03□□□□□ -0.16
LINC00544-201ENST00000400540 NCOR1O75376 2440 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms