RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 APPP05067 770 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 BMP3P12645 472 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 TDO2P48775 406 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 PTPN5P54829 565 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 TMEM240Q5SV17 173 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 RASIP1Q5U651 963 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 THSD4Q6ZMP0 1018 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 ARMCX2Q7L311 632 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 STK11IPQ8N1F8 1099 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 CEP95Q96GE4 821 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 ZFRQ96KR1 1074 aaKnown RBP10.42□□□□□ -0.74
CAPN3-208ENST00000397204 NACAP1Q9BZK3 213 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 DCTPP1Q9H773 170 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 MYO9BQ13459 2157 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 MYADML2A6NDP7 307 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 ASB14A6NK59 587 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 GPAA1O43292 621 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 PLA2G6O60733 806 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 PRDM1O75626 825 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 CABYRO75952 493 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 SLC3A2P08195 630 aaKnown RBP10.41□□□□□ -0.74
CAPN3-208ENST00000397204 PDE4BQ07343 736 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 TKFCQ3LXA3 575 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 SLFN13Q68D06 897 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 CCDC129Q6ZRS4 1044 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 FAM160B2Q86V87 743 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 CCDC144CPQ8IYA2 1237 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 IFNL3Q8IZI9 196 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 FAM133AQ8N9E0 248 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 STAG1Q8WVM7 1258 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 TATDN2Q93075 761 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 TIFAQ96CG3 184 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 FGD4Q96M96 766 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 KATNBL1Q9H079 304 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 PRDM6Q9NQX0 595 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 RCAN3Q9UKA8 241 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 LTBP2Q14767 1821 aa10.41□□□□□ -0.74
CAPN3-208ENST00000397204 TMEM232C9JQI7 657 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 CTAGE5O15320 804 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 CD4P01730 458 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 TSPY3P0CV98 308 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 TSPY8P0CW00 308 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 CSF2RAP15509 400 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 TFAP4Q01664 338 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 TNFAIP2Q03169 654 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 IQSEC1Q6DN90 963 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 PSRC1Q6PGN9 363 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-208ENST00000397204 NUDT18Q6ZVK8 323 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 ZNF365Q70YC5 407 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 FAM126BQ8IXS8 530 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 SLC43A3Q8NBI5 491 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 TTC13Q8NBP0 860 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 GMCL1Q96IK5 515 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 GAS2L1Q99501 681 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-208ENST00000397204 EPB41L4AQ9HCS5 686 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-208ENST00000397204 IL23AQ9NPF7 189 aa10.4□□□□□ -0.74
CAPN3-208ENST00000397204 BAZ2AQ9UIF9 1905 aaKnown RBP10.4□□□□□ -0.74
CAPN3-208ENST00000397204 ADCY6O43306 1168 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 ZEB2O60315 1214 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 FGBP02675 491 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 STAT2P52630 851 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 CNTN2Q02246 1040 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
CAPN3-208ENST00000397204 RCSD1Q6JBY9 416 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 NOL8Q76FK4 1167 aaKnown RBP10.39□□□□□ -0.75
CAPN3-208ENST00000397204 HERVK_113Q902F9 699 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 TRERF1Q96PN7 1200 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 PBX4Q9BYU1 374 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 AP5M1Q9H0R1 490 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
CAPN3-208ENST00000397204 HOMER2Q9NSB8 354 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 MSRAQ9UJ68 235 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 GNEQ9Y223 722 aaKnown RBP10.39□□□□□ -0.75
CAPN3-208ENST00000397204 Q9Y3F1 56 aa10.39□□□□□ -0.75
CAPN3-208ENST00000397204 CHD7Q9P2D1 2997 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 ZNF536O15090 1300 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 SOWAHBA6NEL2 793 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 GRXCR1A8MXD5 290 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 M0R2C6 588 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 ERC2O15083 957 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 DYNC1LI2O43237 492 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-208ENST00000397204 ACRP10323 421 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 MCCP23508 829 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 CYP2C18P33260 490 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 SLC1A4P43007 532 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 IKQ13123 557 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-208ENST00000397204 ITGA7Q13683 1181 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 RAB30Q15771 203 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 FSCN1Q16658 493 aaKnown RBP10.38□□□□□ -0.75
CAPN3-208ENST00000397204 CXCL17Q6UXB2 119 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 RPUSD2Q8IZ73 545 aaKnown RBP10.38□□□□□ -0.75
CAPN3-208ENST00000397204 LRRC47Q8N1G4 583 aaKnown RBP10.38□□□□□ -0.75
CAPN3-208ENST00000397204 ATXN2LQ8WWM7 1075 aaKnown RBP10.38□□□□□ -0.75
CAPN3-208ENST00000397204 AGBL1Q96MI9 1066 aa10.38□□□□□ -0.75
CAPN3-208ENST00000397204 PPP1R12CQ9BZL4 782 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms