RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ZNF592Q92610 1267 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 MTRQ99707 1265 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
SNX6-202ENST00000396526 BICDL2A1A5D9 508 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 NAALADL2Q58DX5 795 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 AGBL3Q8NEM8 1001 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 MTMR9Q96QG7 549 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 BMP2KQ9NSY1 1161 aaPredicted RBP18.13■□□□□ 0.49
SNX6-202ENST00000396526 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 ARHGAP6O43182 974 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 RHOBTB3O94955 611 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 USP11P51784 963 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 KMT5BQ4FZB7 885 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 SYDE2Q5VT97 1194 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 CNNM4Q6P4Q7 775 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 JDP2Q8WYK2 163 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 VEZTQ9HBM0 779 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 PIM2Q9P1W9 311 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 ZNF70Q9UC06 446 aaPredicted RBP18.12■□□□□ 0.49
SNX6-202ENST00000396526 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.12■□□□□ 0.492e-6■■■■□ 19.3
SNX6-202ENST00000396526 COL2A1P02458 1487 aaPredicted RBP18.12■□□□□ 0.49
SNX6-202ENST00000396526 NDUFB10O96000 172 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 CDKAL1Q5VV42 579 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 FKBP1CQ5VVH2 108 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 FCHSD1Q86WN1 690 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 KIF18AQ8NI77 898 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 DHTKD1Q96HY7 919 aaPredicted RBP18.12■□□□□ 0.49
SNX6-202ENST00000396526 GOPCQ9HD26 462 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 PCDHA12Q9UN75 941 aa18.12■□□□□ 0.49
SNX6-202ENST00000396526 CLRN2A0PK11 232 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 SPDYE3A6NKU9 549 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 TDP2O95551 362 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 POLD1P28340 1107 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 PDE4DQ08499 809 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 SNX29Q8TEQ0 813 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 C7orf25Q9BPX7 421 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 PRCPP42785 496 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 BAG1Q99933 345 aaPredicted RBP18.11■□□□□ 0.49
SNX6-202ENST00000396526 TEX2Q8IWB9 1127 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 ADSSL1Q8N142 457 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 TRIM47Q96LD4 638 aa18.11■□□□□ 0.49
SNX6-202ENST00000396526 GOLGA6L9A6NEM1 432 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 AKR1B15C9JRZ8 316 aaPredicted RBP18.1■□□□□ 0.49
SNX6-202ENST00000396526 STX10O60499 249 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 SLURP2P0DP57 97 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 CLK2P49760 499 aaKnown RBP18.1■□□□□ 0.49
SNX6-202ENST00000396526 FAM114A1Q8IWE2 563 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 TRIM9Q9C026 710 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 NT5C3AQ9H0P0 336 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 GDAQ9Y2T3 454 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 PPP1R11O60927 126 aaPredicted RBP18.1■□□□□ 0.49
SNX6-202ENST00000396526 MED15Q96RN5 788 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 ADD3Q9UEY8 706 aaKnown RBP18.1■□□□□ 0.49
SNX6-202ENST00000396526 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 TGFB2P61812 414 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 SLFN12Q8IYM2 578 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 GIMAP8Q8ND71 665 aaPredicted RBP18.1■□□□□ 0.49
SNX6-202ENST00000396526 CHURC1Q8WUH1 139 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 LARP4BQ92615 738 aaKnown RBP18.1■□□□□ 0.49
SNX6-202ENST00000396526 ANO3Q9BYT9 981 aa18.1■□□□□ 0.49
SNX6-202ENST00000396526 KDM3AQ9Y4C1 1321 aa18.09■□□□□ 0.49
SNX6-202ENST00000396526 LIMA1Q9UHB6 759 aaKnown RBP18.09■□□□□ 0.49
SNX6-202ENST00000396526 SLC26A4O43511 780 aa18.09■□□□□ 0.49
SNX6-202ENST00000396526 MMP14P50281 582 aa18.09■□□□□ 0.49
SNX6-202ENST00000396526 SPDYE2Q495Y8 402 aa18.09■□□□□ 0.49
SNX6-202ENST00000396526 STK24Q9Y6E0 443 aa18.09■□□□□ 0.49
SNX6-202ENST00000396526 KCNJ18B7U540 433 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 SLC37A4O43826 429 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 TBX2Q13207 712 aaPredicted RBP18.08■□□□□ 0.49
SNX6-202ENST00000396526 TRIM14Q14142 442 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 KCNJ12Q14500 433 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 MOXD1Q6UVY6 613 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 CNGA4Q8IV77 575 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 GMLQ99445 158 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 INTS13Q9NVM9 706 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 SCN9AQ15858 1988 aa18.08■□□□□ 0.49
SNX6-202ENST00000396526 PVALEFA0A1B0GWK0 134 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L15C9J2P7 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L13C9JLJ4 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L11C9JVI0 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L18D6R9N7 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L22D6RA61 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L17D6RBQ6 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L19D6RCP7 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L20D6RJB6 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L24Q0WX57 530 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 USP17L6PQ6QN14 398 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 FAM83AQ86UY5 434 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 NAA15Q9BXJ9 866 aaKnown RBP18.08■□□□□ 0.48
SNX6-202ENST00000396526 LRRC10BA6NIK2 292 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 PES1O00541 588 aaKnown RBP18.08■□□□□ 0.48
SNX6-202ENST00000396526 EEF1GP26641 437 aaKnown RBP18.08■□□□□ 0.48
SNX6-202ENST00000396526 STAT2P52630 851 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 TNIP1Q15025 636 aa18.08■□□□□ 0.48
SNX6-202ENST00000396526 DALRD3Q5D0E6 543 aaKnown RBP18.08■□□□□ 0.48
SNX6-202ENST00000396526 MTERF4Q7Z6M4 381 aaKnown RBP18.08■□□□□ 0.48
SNX6-202ENST00000396526 SIAH1Q8IUQ4 282 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms