RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 DCDC2CA8MYV0 355 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 MEFVO15553 781 aaPredicted RBP16.13■□□□□ 0.17
SFXN3-202ENST00000393459 OPA1O60313 960 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 PDE8BO95263 885 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 CYP2D6P10635 497 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 NF2P35240 595 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
SFXN3-202ENST00000393459 PAPD7Q5XG87 772 aaKnown RBP16.13■□□□□ 0.17
SFXN3-202ENST00000393459 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 MAEAQ7L5Y9 396 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 SRBD1Q8N5C6 995 aaKnown RBP16.13■□□□□ 0.17
SFXN3-202ENST00000393459 UBLCP1Q8WVY7 318 aaPredicted RBP16.13■□□□□ 0.17
SFXN3-202ENST00000393459 ARHGAP20Q9P2F6 1191 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 RASSF10A6NK89 507 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 BUB1BO60566 1050 aaPredicted RBP16.13■□□□□ 0.17
SFXN3-202ENST00000393459 SPAG1Q07617 926 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 CCDC13Q8IYE1 715 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 ZKSCAN4Q969J2 545 aaPredicted RBP16.13■□□□□ 0.17
SFXN3-202ENST00000393459 CCDC113Q9H0I3 377 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 VIPAS39Q9H9C1 493 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 LRRC4CQ9HCJ2 640 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 ODF2LQ9ULJ1 636 aa16.13■□□□□ 0.17
SFXN3-202ENST00000393459 FAM205AQ6ZU69 1335 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 LRRC53A6NM62 1247 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 USO1O60763 962 aaKnown RBP16.12■□□□□ 0.17
SFXN3-202ENST00000393459 MCM3P25205 808 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 QPCTQ16769 361 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 CCDC40Q4G0X9 1142 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 PDXDC2PQ6P474 469 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 HEATR3Q7Z4Q2 680 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
SFXN3-202ENST00000393459 FBXL16Q8N461 479 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 LRRC15Q8TF66 581 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 TACO1Q9BSH4 297 aaKnown RBP16.12■□□□□ 0.17
SFXN3-202ENST00000393459 MYO1AQ9UBC5 1043 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
SFXN3-202ENST00000393459 LETM2Q2VYF4 491 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 KLC4Q9NSK0 619 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 BTG4Q9NY30 223 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 PLAAQ9Y263 795 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 CEP83Q9Y592 693 aa16.12■□□□□ 0.17
SFXN3-202ENST00000393459 COPB2P35606 906 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 SUGP1Q8IWZ8 645 aaKnown RBP16.11■□□□□ 0.17
SFXN3-202ENST00000393459 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
SFXN3-202ENST00000393459 PACSIN1Q9BY11 444 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 DPH5Q9H2P9 285 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 LAMB4A4D0S4 1761 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 USP17L21D6R901 530 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 PRPF38AQ8NAV1 312 aaKnown RBP16.11■□□□□ 0.17
SFXN3-202ENST00000393459 GOPCQ9HD26 462 aa16.11■□□□□ 0.17
SFXN3-202ENST00000393459 TMCO5BA8MYB1 307 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 CIAO1O76071 339 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 USP8P40818 1118 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 TECP42680 631 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 TUBB2AQ13885 445 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 UBE3CQ15386 1083 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 CCDC121Q6ZUS5 278 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 NLRP14Q86W24 1093 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 ESR2Q92731 530 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 TUBB2BQ9BVA1 445 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 TCP11Q8WWU5 503 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 THOC1Q96FV9 657 aaKnown RBP16.1■□□□□ 0.17
SFXN3-202ENST00000393459 LBHD1Q9BQE6 289 aaPredicted RBP16.1■□□□□ 0.17
SFXN3-202ENST00000393459 CCDC194A0A1B0GVG4 234 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 GOLGA8KD6RF30 607 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 CLNS1AP54105 237 aaKnown RBP16.1■□□□□ 0.17
SFXN3-202ENST00000393459 CEP89Q96ST8 783 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 PHF20Q9BVI0 1012 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 CNNM2Q9H8M5 875 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 SLC40A1Q9NP59 571 aa16.1■□□□□ 0.17
SFXN3-202ENST00000393459 H7C1D1 291 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 PALMO75781 387 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 PSEN1P49768 467 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 EPHB4P54760 987 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
SFXN3-202ENST00000393459 DTHD1Q6ZMT9 781 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 RPAINQ86UA6 219 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 NELFCDQ8IXH7 590 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 ADSSL1Q8N142 457 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 ZSCAN10Q96SZ4 725 aaPredicted RBP16.09■□□□□ 0.17
SFXN3-202ENST00000393459 GLI3P10071 1580 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 SHOX2O60902 331 aaPredicted RBP16.09■□□□□ 0.17
SFXN3-202ENST00000393459 CLTAP09496 248 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 IFNAR2P48551 515 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 IQCEQ6IPM2 695 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 AMOTL1Q8IY63 956 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 FERMT2Q96AC1 680 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 ALS2CR12Q96Q35 445 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 DNAJC7Q99615 494 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 ITIH6Q6UXX5 1313 aa16.09■□□□□ 0.17
SFXN3-202ENST00000393459 GOLGA6L10A6NI86 522 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms