RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 GRB10Q13322 594 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 QRICH1Q2TAL8 776 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 CC2D2BQ6DHV5 1058 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 PPP4R3AQ6IN85 833 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 IRF2BP1Q8IU81 584 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 CPLX3Q8WVH0 158 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 ANKRD7Q92527 254 aa28.75■■■□□ 2.19
SMARCD3-203ENST00000392811 PPIP5K2O43314 1243 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 ICA1Q05084 483 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 EN1Q05925 392 aaPredicted RBP28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 NCBP1Q09161 790 aaKnown RBP28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 SYCP1Q15431 976 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 TOGARAM2Q6ZUX3 1019 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 TMEM179Q6ZVK1 233 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 SUPT20HQ8NEM7 779 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 PSMA7O14818 248 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 GDF11O95390 407 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 ASIC1P78348 528 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 AMPD3Q01432 767 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 TRIM65Q6PJ69 517 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 CREBRFQ8IUR6 639 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 CCDC47Q96A33 483 aaKnown RBP28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 PNMA5Q96PV4 448 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 CAMKK2Q96RR4 588 aa28.74■■■□□ 2.19
SMARCD3-203ENST00000392811 C21orf2O43822 256 aa28.73■■■□□ 2.19
SMARCD3-203ENST00000392811 PDE4DQ08499 809 aa28.73■■■□□ 2.19
SMARCD3-203ENST00000392811 PRMT6Q96LA8 375 aaPredicted RBP28.73■■■□□ 2.19
SMARCD3-203ENST00000392811 EXOC1Q9NV70 894 aa28.73■■■□□ 2.19
SMARCD3-203ENST00000392811 ATRNL1Q5VV63 1379 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 POTEMA6NI47 508 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 MFAP3LO75121 409 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 ENTPD3O75355 529 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 PDIA5Q14554 519 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 ABCB5Q2M3G0 1257 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 RAB34Q9BZG1 259 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 BLOC1S4Q9NUP1 217 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 ATF5Q9Y2D1 282 aaPredicted RBP28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 GYPCP04921 128 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 CASP14P31944 242 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 DHTKD1Q96HY7 919 aaPredicted RBP28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 DDX25Q9UHL0 483 aaKnown RBP28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 MYH7BA7E2Y1 1941 aa28.72■■■□□ 2.19
SMARCD3-203ENST00000392811 NAA30Q147X3 362 aaPredicted RBP28.71■■■□□ 2.19
SMARCD3-203ENST00000392811 CDC37Q16543 378 aaPredicted RBP28.71■■■□□ 2.19
SMARCD3-203ENST00000392811 TTI2Q6NXR4 508 aa28.71■■■□□ 2.19
SMARCD3-203ENST00000392811 TRIM47Q96LD4 638 aa28.71■■■□□ 2.19
SMARCD3-203ENST00000392811 STK17AQ9UEE5 414 aa28.71■■■□□ 2.19
SMARCD3-203ENST00000392811 ZNF215Q9UL58 517 aaPredicted RBP28.71■■■□□ 2.19
SMARCD3-203ENST00000392811 PHLPP2Q6ZVD8 1323 aa28.71■■■□□ 2.19
SMARCD3-203ENST00000392811 SV2BQ7L1I2 683 aa28.7■■■□□ 2.19
SMARCD3-203ENST00000392811 THAP9Q9H5L6 903 aa28.7■■■□□ 2.19
SMARCD3-203ENST00000392811 DNAI1Q9UI46 699 aa28.7■■■□□ 2.19
SMARCD3-203ENST00000392811 PCDHA1Q9Y5I3 950 aa28.7■■■□□ 2.19
SMARCD3-203ENST00000392811 ARFGEF1Q9Y6D6 1849 aa28.7■■■□□ 2.19
SMARCD3-203ENST00000392811 F5H6K3 240 aa28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 FXR1P51114 621 aaKnown RBP eCLIP28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 JAG1P78504 1218 aa28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 KLRC3Q07444 240 aa28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 STK4Q13043 487 aa28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 MTF1Q14872 753 aa28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 CDK5RAP3Q96JB5 506 aa28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 SRRTQ9BXP5 876 aaKnown RBP28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 L2HGDHQ9H9P8 463 aa28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.7■■■□□ 2.18
SMARCD3-203ENST00000392811 SOWAHDA6NJG2 315 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L15C9J2P7 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L13C9JLJ4 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L11C9JVI0 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L18D6R9N7 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L22D6RA61 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L17D6RBQ6 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L19D6RCP7 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L20D6RJB6 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L24Q0WX57 530 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 USP17L6PQ6QN14 398 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 CNGA4Q8IV77 575 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 HAS1Q92839 578 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 NUDT12Q9BQG2 462 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 NAA15Q9BXJ9 866 aaKnown RBP28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 FCER1AP12319 257 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 MCM6Q14566 821 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 GMCL1P1Q8NEA9 526 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 SNX29Q8TEQ0 813 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 DUSP9Q99956 384 aaKnown RBP28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 DESI2Q9BSY9 194 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 GLT8D2Q9H1C3 349 aa28.69■■■□□ 2.18
SMARCD3-203ENST00000392811 GOLGA6L9A6NEM1 432 aa28.68■■■□□ 2.18
SMARCD3-203ENST00000392811 GCFC2P16383 781 aaKnown RBP28.68■■■□□ 2.18
SMARCD3-203ENST00000392811 EEF1GP26641 437 aaKnown RBP28.68■■■□□ 2.18
SMARCD3-203ENST00000392811 KRT79Q5XKE5 535 aa28.68■■■□□ 2.18
SMARCD3-203ENST00000392811 LARP4BQ92615 738 aaKnown RBP28.68■■■□□ 2.18
SMARCD3-203ENST00000392811 P2RX5Q93086 422 aa28.68■■■□□ 2.18
SMARCD3-203ENST00000392811 NUP88Q99567 741 aaPredicted RBP28.68■■■□□ 2.18
SMARCD3-203ENST00000392811 MYMKA6NI61 221 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 TPM1P09493 284 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 CCNE1P24864 410 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 CCDC51Q96ER9 411 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 GTPBP4Q9BZE4 634 aaKnown RBP28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 COL2A1P02458 1487 aaPredicted RBP28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 FANCGO15287 622 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms