RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
EXOSC9-202ENST00000379663 MRPL11Q9Y3B7 192 aaKnown RBP13.68□□□□□ -0.22
EXOSC9-202ENST00000379663 A0A1W2PQ27 194 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 A0A1W2PQ64 194 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 A0A1W2PQD8 194 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 ME1P48163 572 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 NEK8Q86SG6 692 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 C2orf69Q8N8R5 385 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 SLC10A4Q96EP9 437 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 FBXO2Q9UK22 296 aaPredicted RBP13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
EXOSC9-202ENST00000379663 KIF3CO14782 793 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 ZBED4O75132 1171 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 ZBTB48P10074 688 aaPredicted RBP13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 PTPREP23469 700 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 HSD17B4P51659 736 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 SNAPC2Q13487 334 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 FASTKD5Q7L8L6 764 aaKnown RBP13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 CLEC4DQ8WXI8 215 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 ANO3Q9BYT9 981 aa13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 GPBP1L1Q9HC44 474 aaPredicted RBP13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 SRPRBQ9Y5M8 271 aaKnown RBP13.66□□□□□ -0.22
EXOSC9-202ENST00000379663 FAM237AA0A1B0GTK4 181 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 ATP2B1P20020 1258 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 MARCKSP29966 332 aaPredicted RBP13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 PTGDRQ13258 359 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 TMEM132BQ14DG7 1078 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 GPAT2Q6NUI2 795 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 GADL1Q6ZQY3 521 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 KRI1Q8N9T8 703 aaKnown RBP13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 MAP3K20Q9NYL2 800 aaKnown RBP13.65□□□□□ -0.22
EXOSC9-202ENST00000379663 GOLGA6L4A6NEF3 574 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 LAD1O00515 517 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 CUTAO60888 179 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 LIG1P18858 919 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MCM7P33993 719 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 SREBF1P36956 1147 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 ZNF174Q15697 407 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 PPP4R3AQ6IN85 833 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MOXD1Q6UVY6 613 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MB21D1Q8N884 522 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 FERMT2Q96AC1 680 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MAF1Q9H063 256 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 ASCC2Q9H1I8 757 aaPredicted RBP13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MRVI1Q9Y6F6 885 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 LOXHD1Q8IVV2 1947 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 SPDYE3A6NKU9 549 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 NFIBO00712 420 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 CFBP00751 764 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 CMA1P23946 247 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 USP11P51784 963 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 GRIN1Q05586 938 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 SNW1Q13573 536 aaKnown RBP13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 RESP18Q5W5W9 173 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MRPS27Q92552 414 aaKnown RBP13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 TBC1D5Q92609 795 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 SLC45A1Q9Y2W3 748 aa13.64□□□□□ -0.23
EXOSC9-202ENST00000379663 MCM3APO60318 1980 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 ALAS1P13196 640 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 CYP3A7P24462 503 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 HOXA13P31271 388 aaPredicted RBP13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 PRPHP41219 470 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 GTF2A2P52657 109 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 HERVK_113P62684 666 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 PABPC4Q13310 644 aaKnown RBP eCLIP13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 TKFCQ3LXA3 575 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 SNRNP48Q6IEG0 339 aaKnown RBP13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 SAPCD2Q86UD0 394 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 MCF2L2Q86YR7 1114 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 CLIC6Q96NY7 704 aa13.63□□□□□ -0.23
EXOSC9-202ENST00000379663 TMEM60Q9H2L4 133 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms