RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 GRIN2CQ14957 1233 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 TTC39AQ5SRH9 613 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 TTC39BQ5VTQ0 682 aaPredicted RBP6.82□□□□□ -1.32
SSX1-201ENST00000376919 PODNQ7Z5L7 613 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 SLITRK4Q8IW52 837 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 LILRB2Q8N423 598 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 SSH3Q8TE77 659 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 KIFC2Q96AC6 838 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 SHDQ96IW2 340 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 DNAJC7Q99615 494 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 RRAGCQ9HB90 399 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 SENP2Q9HC62 589 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 TMEM260Q9NX78 707 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 HACL1Q9UJ83 578 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 JAG2Q9Y219 1238 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
SSX1-201ENST00000376919 MYO3BQ8WXR4 1341 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 SCN9AQ15858 1988 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 H7C1D1 291 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 PSMD14O00487 310 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 IFIT2P09913 472 aaKnown RBP6.81□□□□□ -1.32
SSX1-201ENST00000376919 VEGFAP15692 232 aaPredicted RBP6.81□□□□□ -1.32
SSX1-201ENST00000376919 GMPSP49915 693 aaPredicted RBP6.81□□□□□ -1.32
SSX1-201ENST00000376919 GYS2P54840 703 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 CXCL9Q07325 125 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 CAMK2GQ13555 558 aaPredicted RBP6.81□□□□□ -1.32
SSX1-201ENST00000376919 RASGRF1Q13972 1273 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 DDR2Q16832 855 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 CCDC158Q5M9N0 1113 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 FIGNL1Q6PIW4 674 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 DTHD1Q6ZMT9 781 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 RIPOR1Q6ZS17 1223 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 C16orf86Q6ZW13 317 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 ATG9AQ7Z3C6 839 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 AACSQ86V21 672 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 CLASRPQ8N2M8 674 aaKnown RBP6.81□□□□□ -1.32
SSX1-201ENST00000376919 CELF2-AS1Q8N7Q2 184 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 GOLM1Q8NBJ4 401 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 EXOC6Q8TAG9 804 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 KIF1BPQ96EK5 621 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 FEZ1Q99689 392 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 ZCCHC2Q9C0B9 1178 aaKnown RBP6.81□□□□□ -1.32
SSX1-201ENST00000376919 CEP44Q9C0F1 390 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 KANSL2Q9H9L4 492 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 CD209Q9NNX6 404 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 IL1RAPL2Q9NP60 686 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 BRD7Q9NPI1 651 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 HDAC9Q9UKV0 1011 aa6.81□□□□□ -1.32
SSX1-201ENST00000376919 MAST2Q6P0Q8 1798 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 WTIPA6NIX2 430 aaPredicted RBP6.8□□□□□ -1.32
SSX1-201ENST00000376919 YDJCA8MPS7 323 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 F8W031 263 aaPredicted RBP6.8□□□□□ -1.32
SSX1-201ENST00000376919 PDPK1O15530 556 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 FBXO24O75426 580 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 THBS1P07996 1170 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 FAM157BP0CG42 384 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 RPS12P25398 132 aaKnown RBP6.8□□□□□ -1.32
SSX1-201ENST00000376919 EPHX2P34913 555 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 RBM5P52756 815 aaKnown RBP eCLIP6.8□□□□□ -1.32
SSX1-201ENST00000376919 PEAR1Q5VY43 1037 aaPredicted RBP6.8□□□□□ -1.32
SSX1-201ENST00000376919 TTLL5Q6EMB2 1281 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 CCDC81Q6ZN84 652 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 TXNRD3Q86VQ6 643 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 VGLL2Q8N8G2 317 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 STAG1Q8WVM7 1258 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 TRIM47Q96LD4 638 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 IRX2Q9BZI1 471 aaPredicted RBP6.8□□□□□ -1.32
SSX1-201ENST00000376919 LRRCC1Q9C099 1032 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 ABCB6Q9NP58 842 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 ACTR10Q9NZ32 417 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 TLR6Q9Y2C9 796 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 FPGT-TNNI3KV9GXZ4 949 aa6.8□□□□□ -1.32
SSX1-201ENST00000376919 ZNF646O15015 1829 aaPredicted RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 ECM29Q5VYK3 1845 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 LOC102724159A0A0B4J2E5 919 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 ATXN7O15265 892 aaPredicted RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 EFSO43281 561 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 TPD52L2O43399 206 aaKnown RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 UQCRFS1P1P0C7P4 283 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 ADORA1P30542 326 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 TIMM10P62072 90 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 UBAP2LQ14157 1087 aaKnown RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 PWP2Q15269 919 aaKnown RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 MFSD14BQ5SR56 506 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 STRIP1Q5VSL9 837 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 C15orf52Q6ZUT6 534 aaKnown RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 PNMA8AQ86V59 439 aaPredicted RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 DZIP1Q86YF9 867 aaKnown RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 OR6P1Q8NGX9 317 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 TBC1D22AQ8WUA7 517 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 LRRC3Q9BY71 257 aa6.79□□□□□ -1.32
SSX1-201ENST00000376919 CCDC8Q9H0W5 538 aaPredicted RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 NUCKS1Q9H1E3 243 aaKnown RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 RWDD1Q9H446 243 aaPredicted RBP6.79□□□□□ -1.32
SSX1-201ENST00000376919 LIN7BQ9HAP6 207 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms