RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 POLR2FP61218 127 aaKnown RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 CNNM4Q6P4Q7 775 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 JAKMIP2Q96AA8 810 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 PYM1Q9BRP8 204 aaKnown RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 GTPBP4Q9BZE4 634 aaKnown RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 DISC1Q9NRI5 854 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 TRIM10Q9UDY6 481 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 NHSL1Q5SYE7 1610 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 SEMA3EO15041 775 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 EEF2P13639 858 aaKnown RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 RASA1P20936 1047 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 PDE6BP35913 854 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 SLC27A3Q5K4L6 730 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 CCDC65Q8IXS2 484 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 CHP1Q99653 195 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 CRKP46108 304 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 NCBP1Q09161 790 aaKnown RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 TNIP1Q15025 636 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 SHROOM1Q2M3G4 852 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 UTP14CQ5TAP6 766 aaKnown RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 CYP26C1Q6V0L0 522 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 FBXO11Q86XK2 927 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 SCLT1Q96NL6 688 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 DNM3Q9UQ16 869 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 EPN1Q9Y6I3 576 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-203ENST00000376619 A0A087X0B3 334 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 GOLGA6L9A6NEM1 432 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 ONECUT3O60422 494 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-203ENST00000376619 FBXO38Q6PIJ6 1188 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 ENOX1Q8TC92 643 aaKnown RBP12.37□□□□□ -0.43
HDAC6-203ENST00000376619 LARP4BQ92615 738 aaKnown RBP12.37□□□□□ -0.43
HDAC6-203ENST00000376619 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 POTECB2RU33 542 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 IKBKBO14920 756 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 CCZ1BP86790 482 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 CCZ1P86791 482 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-203ENST00000376619 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
HDAC6-203ENST00000376619 NAA35Q5VZE5 725 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 EEPD1Q7L9B9 569 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 CCDC127Q96BQ5 260 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 ACBD3Q9H3P7 528 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 PANK4Q9NVE7 773 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 FLT1P17948 1338 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 KLK7P49862 253 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 KLHL7Q8IXQ5 586 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 CCDC155Q8N6L0 562 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 TIGD1Q96MW7 591 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 HDAC6Q9UBN7 1215 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 GYS1P13807 737 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 FXR1P51114 621 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDAC6-203ENST00000376619 FAM26FQ5R3K3 315 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 LEKR1Q6ZMV7 388 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 FLAD1Q8NFF5 587 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-203ENST00000376619 PCIF1Q9H4Z3 704 aa12.37□□□□□ -0.43
HDAC6-203ENST00000376619 POTEFA5A3E0 1075 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
HDAC6-203ENST00000376619 STK4Q13043 487 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 POTEEQ6S8J3 1075 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 ADGRF4Q8IZF3 695 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 ALS2CR12Q96Q35 445 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 PHF20Q9BVI0 1012 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 IFIH1Q9BYX4 1025 aaKnown RBP12.36□□□□□ -0.43
HDAC6-203ENST00000376619 TACC1O75410 805 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 PRPF6O94906 941 aaKnown RBP12.36□□□□□ -0.43
HDAC6-203ENST00000376619 CDR1P51861 262 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 PKN1Q16512 942 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-203ENST00000376619 AGXT2Q9BYV1 514 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 PDGFDQ9GZP0 370 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-203ENST00000376619 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 CETN3O15182 167 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 GAS7O60861 476 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 RASSF7Q02833 373 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 ADAM9Q13443 819 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 HS2ST1Q7LGA3 356 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
HDAC6-203ENST00000376619 ATP2C2O75185 946 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 EIF3JO75822 258 aaKnown RBP12.35□□□□□ -0.43
HDAC6-203ENST00000376619 DNAAF5Q86Y56 855 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 DDX12PQ92771 950 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 MAP3K14Q99558 947 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
HDAC6-203ENST00000376619 TSPYL1Q9H0U9 437 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 PCDHA6Q9UN73 950 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 PCDHA8Q9Y5H6 950 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms