RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 INF2Q27J81 1249 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 FASTKD5Q7L8L6 764 aaKnown RBP11.94□□□□□ -0.5
PDPN-203ENST00000376061 CPXCR1Q8N123 301 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
PDPN-203ENST00000376061 P2RX7Q99572 595 aaKnown RBP11.94□□□□□ -0.5
PDPN-203ENST00000376061 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.94□□□□□ -0.5
PDPN-203ENST00000376061 ZNF214Q9UL59 606 aaPredicted RBP11.94□□□□□ -0.5
PDPN-203ENST00000376061 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
PDPN-203ENST00000376061 PIK3CDO00329 1044 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 SPTLC2O15270 562 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 TRAK2O60296 914 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 OAZ1P54368 228 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
PDPN-203ENST00000376061 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
PDPN-203ENST00000376061 AP3B2Q13367 1082 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 SPRYD7Q5W111 196 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 USP17L6PQ6QN14 398 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 TEX2Q8IWB9 1127 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 CLEC4DQ8WXI8 215 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 ASCC2Q9H1I8 757 aaPredicted RBP11.93□□□□□ -0.5
PDPN-203ENST00000376061 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
PDPN-203ENST00000376061 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
PDPN-203ENST00000376061 NFIBO00712 420 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 ATP2A1O14983 1001 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 MBD3O95983 291 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 ZBTB48P10074 688 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 CETPP11597 493 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 ALAS1P13196 640 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 ME1P48163 572 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 GTF2A2P52657 109 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 GHRHRQ02643 423 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 TMEM132BQ14DG7 1078 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 MUM1L1Q5H9M0 696 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 MCTP2Q6DN12 878 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 POTEEQ6S8J3 1075 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 RASAL3Q86YV0 1011 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 ANO3Q9BYT9 981 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 HOMER2Q9NSB8 354 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 CEP131Q9UPN4 1083 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 DDX49Q9Y6V7 483 aaKnown RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 CCL15-CCL14A0A0B4J2E2 113 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 GCOM1H8Y6P7 765 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 PPP6R2O75170 966 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 BMP15O95972 392 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 CFBP00751 764 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 POLR2MP0CAP2 368 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 MARCKSP29966 332 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 HSD17B4P51659 736 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 HERVK_113P62684 666 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 PABPC4Q13310 644 aaKnown RBP eCLIP11.92□□□□□ -0.5
PDPN-203ENST00000376061 ZNF174Q15697 407 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 CCL15Q16663 113 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 KLHL40Q2TBA0 621 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 SKOR2Q2VWA4 1001 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 SNRNP48Q6IEG0 339 aaKnown RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 SAPCD2Q86UD0 394 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 JMYQ8N9B5 988 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 BRI3BPQ8WY22 251 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 TEX13BQ9BXU2 312 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 RNF146Q9NTX7 359 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 FBXO2Q9UK22 296 aaPredicted RBP11.92□□□□□ -0.5
PDPN-203ENST00000376061 PCDHA7Q9UN72 937 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 RIPK3Q9Y572 518 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 MRVI1Q9Y6F6 885 aa11.92□□□□□ -0.5
PDPN-203ENST00000376061 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 EDIL3O43854 480 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 FOSP01100 380 aaPredicted RBP11.91□□□□□ -0.5
PDPN-203ENST00000376061 MCM7P33993 719 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 ATP2C1P98194 919 aaPredicted RBP11.91□□□□□ -0.5
PDPN-203ENST00000376061 LETM2Q2VYF4 491 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 AXDND1Q5T1B0 1012 aaPredicted RBP11.91□□□□□ -0.5
PDPN-203ENST00000376061 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
PDPN-203ENST00000376061 CRYGNQ8WXF5 182 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 TBC1D5Q92609 795 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 TRERF1Q96PN7 1200 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 BTBD7Q9P203 1132 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
PDPN-203ENST00000376061 LRRC37A2A6NM11 1700 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 A0A1W2PQ27 194 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 A0A1W2PQ64 194 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 A0A1W2PQD8 194 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 GOLGA6L4A6NEF3 574 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 BTBD19C9JJ37 291 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 NEMFO60524 1076 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 PEX10O60683 326 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 CNMDO75829 334 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms