RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 IQCA1LA6NCM1 817 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 SQSTM1Q13501 440 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 MORC3Q14149 939 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 LBRQ14739 615 aaKnown RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 SPC24Q8NBT2 197 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 SSH1Q8WYL5 1049 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 KIF1BPQ96EK5 621 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 RADILQ96JH8 1075 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 YIPF4Q9BSR8 244 aa10.1□□□□□ -0.79
UBR4-201ENST00000375218 HERC5Q9UII4 1024 aaKnown RBP10.1□□□□□ -0.79
UBR4-201ENST00000375218 DOT1LQ8TEK3 1739 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 F6X3S4 739 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 IMPDH2P12268 514 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 RAD52P43351 418 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 NOP2P46087 812 aaKnown RBP10.09□□□□□ -0.79
UBR4-201ENST00000375218 CLCN2P51788 898 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 CBX1P83916 185 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 C1orf122Q6ZSJ8 110 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 SEPT14Q6ZU15 432 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 SLC7A5P1Q8MH63 180 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 POF1BQ8WVV4 589 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 RTF1Q92541 710 aaKnown RBP10.09□□□□□ -0.79
UBR4-201ENST00000375218 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
UBR4-201ENST00000375218 SOS2Q07890 1332 aaPredicted RBP10.09□□□□□ -0.79
UBR4-201ENST00000375218 ARHGAP4P98171 946 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 PPP2R3AQ06190 1150 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 OTOP3Q7RTS5 596 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 TCEANC2Q96MN5 208 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 STARD7Q9NQZ5 370 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 STAP2Q9UGK3 403 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 CICQ96RK0 1608 aaPredicted RBP10.09□□□□□ -0.79
UBR4-201ENST00000375218 ATP9BO43861 1147 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 CD4P01730 458 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 MYBP10242 640 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 ADCY2Q08462 1091 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 MIGA1Q8NAN2 632 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 NSUN6Q8TEA1 469 aaKnown RBP10.09□□□□□ -0.79
UBR4-201ENST00000375218 MOGAT1Q96PD6 335 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 FSD1Q9BTV5 496 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 LAMP5Q9UJQ1 280 aa10.09□□□□□ -0.79
UBR4-201ENST00000375218 CDV3Q9UKY7 258 aaKnown RBP10.09□□□□□ -0.79
UBR4-201ENST00000375218 ICMTO60725 284 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 MUTP22033 750 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 CCNHP51946 323 aaPredicted RBP10.08□□□□□ -0.8
UBR4-201ENST00000375218 PKN1Q16512 942 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 VPS53Q5VIR6 699 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 CEP57L1Q8IYX8 460 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 ASPSCR1Q9BZE9 553 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 GGT7Q9UJ14 662 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 FLT4P35916 1363 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 GOLGA6L10A0A0M3HER8 536 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 TULP2O00295 520 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 CSE1LP55060 971 aaKnown RBP10.08□□□□□ -0.8
UBR4-201ENST00000375218 MTHFD1LQ6UB35 978 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 CCDC186Q7Z3E2 898 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 EPS8L1Q8TE68 723 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 RABGGTAQ92696 567 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 TRERF1Q96PN7 1200 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 PPP1R9BQ96SB3 815 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 ZNF69Q9UC07 566 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 JAG2Q9Y219 1238 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 GZMAP12544 262 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 NEK2P51955 445 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 EXOSC9Q06265 439 aaKnown RBP10.08□□□□□ -0.8
UBR4-201ENST00000375218 SLC10A5Q5PT55 438 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 MFSD6Q6ZSS7 791 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.08□□□□□ -0.8
UBR4-201ENST00000375218 GALNT13Q8IUC8 556 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 JAKMIP1Q96N16 626 aaKnown RBP10.08□□□□□ -0.8
UBR4-201ENST00000375218 SNCAIPQ9Y6H5 919 aa10.08□□□□□ -0.8
UBR4-201ENST00000375218 TTC21AQ8NDW8 1320 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 LRP6O75581 1613 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 J3KRW8 73 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 TRIM27P14373 513 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 MOGSQ13724 837 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 CEP68Q76N32 757 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 CCDC84Q86UT8 332 aaPredicted RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 UTP15Q8TED0 518 aaKnown RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 GTF3C2Q8WUA4 911 aaPredicted RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 NUDT12Q9BQG2 462 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 SGIP1Q9BQI5 828 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 GPATCH1Q9BRR8 931 aaKnown RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 LUC7L2Q9Y383 392 aaKnown RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 ALAS1P13196 640 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 SMAD1Q15797 465 aaKnown RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 TNS3Q68CZ2 1445 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 HS2ST1Q7LGA3 356 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 HOMER1Q86YM7 354 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 SIX5Q8N196 739 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 EPN1Q9Y6I3 576 aaPredicted RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L15C9J2P7 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L12C9JPN9 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L21D6R901 530 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms