RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PCDHA1Q9Y5I3 950 aa20.53■□□□□ 0.88
RXRB-202ENST00000374685 MYH8P13535 1937 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 SOWAHDA6NJG2 315 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 SNHG28P0DPA3 235 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 JAG1P78504 1218 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.88
RXRB-202ENST00000374685 QRICH1Q2TAL8 776 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 STYK1Q6J9G0 422 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 KCNJ18B7U540 433 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 ZBTB5O15062 677 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 IDEP14735 1019 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 NOVP48745 357 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 KCNJ12Q14500 433 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 CDKAL1Q5VV42 579 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 CUL5Q93034 780 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 CALML4Q96GE6 196 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 CCSER1Q9C0I3 900 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 VEZTQ9HBM0 779 aa20.52■□□□□ 0.88
RXRB-202ENST00000374685 CASP14P31944 242 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 MCM6Q14566 821 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 ABCB5Q2M3G0 1257 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 MMTAG2Q9BU76 263 aaKnown RBP20.51■□□□□ 0.87
RXRB-202ENST00000374685 PPP1R1BQ9UD71 204 aaPredicted RBP20.51■□□□□ 0.87
RXRB-202ENST00000374685 ZNF215Q9UL58 517 aaPredicted RBP20.51■□□□□ 0.87
RXRB-202ENST00000374685 PLIN4Q96Q06 1357 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 MYO1BO43795 1136 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 SRRTQ9BXP5 876 aaKnown RBP20.51■□□□□ 0.87
RXRB-202ENST00000374685 SLC39A2Q9NP94 309 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 EXOC1Q9NV70 894 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 RWDD2AQ9UIY3 292 aa20.51■□□□□ 0.87
RXRB-202ENST00000374685 AKR1B15C9JRZ8 316 aaPredicted RBP20.5■□□□□ 0.87
RXRB-202ENST00000374685 LAD1O00515 517 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 HMGB2P26583 209 aaKnown RBP20.5■□□□□ 0.87
RXRB-202ENST00000374685 TBX2Q13207 712 aaPredicted RBP20.5■□□□□ 0.87
RXRB-202ENST00000374685 GPATCH4Q5T3I0 446 aaKnown RBP20.5■□□□□ 0.87
RXRB-202ENST00000374685 POTEAQ6S8J7 498 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 TMEM139Q8IV31 216 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 SNX29Q8TEQ0 813 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 F5H6K3 240 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 EDIL3O43854 480 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 PRPHP41219 470 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 FAM193AP78312 1265 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 KLRC3Q07444 240 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 RAD51AP2Q09MP3 1159 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 STK4Q13043 487 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 CDC37Q16543 378 aaPredicted RBP20.5■□□□□ 0.87
RXRB-202ENST00000374685 LARGE2Q8N3Y3 721 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 KBTBD4Q9NVX7 518 aa20.5■□□□□ 0.87
RXRB-202ENST00000374685 DDX25Q9UHL0 483 aaKnown RBP20.5■□□□□ 0.87
RXRB-202ENST00000374685 KLRC4O43908 158 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 UBXN1Q04323 297 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 CDAN1Q8IWY9 1227 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 CCDC17Q96LX7 622 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 DHX36Q9H2U1 1008 aaKnown RBP20.49■□□□□ 0.87
RXRB-202ENST00000374685 KANSL2Q9H9L4 492 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 PPP2R2CQ9Y2T4 447 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 RRP1BQ14684 758 aaKnown RBP20.49■□□□□ 0.87
RXRB-202ENST00000374685 TMEM266Q2M3C6 531 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 ANKRD20A12PQ8NF67 263 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 TRIM9Q9C026 710 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 A0A0U1RQJ8 604 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 ARHGAP6O43182 974 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 SMARCA1P28370 1054 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
RXRB-202ENST00000374685 MRPL12P52815 198 aaKnown RBP20.49■□□□□ 0.87
RXRB-202ENST00000374685 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
RXRB-202ENST00000374685 TCP11X2Q5H9J9 407 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 MIGA2Q7L4E1 593 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 GPIHBP1Q8IV16 184 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 ADSSL1Q8N142 457 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 ATRIPQ8WXE1 791 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 RIC8AQ9NPQ8 531 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 LZTFL1Q9NQ48 299 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 CALCOCO1Q9P1Z2 691 aa20.49■□□□□ 0.87
RXRB-202ENST00000374685 PSDA5PKW4 1024 aaPredicted RBP20.48■□□□□ 0.87
RXRB-202ENST00000374685 STIM1Q13586 685 aa20.48■□□□□ 0.87
RXRB-202ENST00000374685 SIAH1Q8IUQ4 282 aa20.48■□□□□ 0.87
RXRB-202ENST00000374685 CTAGE1Q96RT6 745 aa20.48■□□□□ 0.87
RXRB-202ENST00000374685 ESYT2A0FGR8 921 aa20.48■□□□□ 0.87
RXRB-202ENST00000374685 PSMA7O14818 248 aa20.48■□□□□ 0.87
RXRB-202ENST00000374685 CCDC84Q86UT8 332 aaPredicted RBP20.48■□□□□ 0.87
RXRB-202ENST00000374685 AK8Q96MA6 479 aa20.48■□□□□ 0.87
RXRB-202ENST00000374685 NDUFB10O96000 172 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 HOXA13P31271 388 aaPredicted RBP20.47■□□□□ 0.87
RXRB-202ENST00000374685 ECE1P42892 770 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 GRB10Q13322 594 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 KCNK18Q7Z418 384 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 LRRN4CLQ8ND94 238 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 IRX2Q9BZI1 471 aaPredicted RBP20.47■□□□□ 0.87
RXRB-202ENST00000374685 SERPINA10Q9UK55 444 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 NRXN2Q9P2S2 1712 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 RNF225M0QZC1 329 aaPredicted RBP20.47■□□□□ 0.87
RXRB-202ENST00000374685 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
RXRB-202ENST00000374685 RBM26Q5T8P6 1007 aaKnown RBP20.47■□□□□ 0.87
RXRB-202ENST00000374685 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
RXRB-202ENST00000374685 ZFP91Q96JP5 570 aaPredicted RBP20.47■□□□□ 0.87
RXRB-202ENST00000374685 URI1O94763 535 aaPredicted RBP20.46■□□□□ 0.87
RXRB-202ENST00000374685 CSGALNACT2Q8N6G5 542 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 MTMR9Q96QG7 549 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 IDI2Q9BXS1 227 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms