RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 COBLO75128 1261 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 YWHAEP62258 255 aaKnown RBP15.53■□□□□ 0.08
LMX1B-202ENST00000373474 FAM26FQ5R3K3 315 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 BZW2Q9Y6E2 419 aaKnown RBP15.53■□□□□ 0.08
LMX1B-202ENST00000373474 LMTK3Q96Q04 1460 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 RASSF7Q02833 373 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 ENOX1Q8TC92 643 aaKnown RBP15.53■□□□□ 0.08
LMX1B-202ENST00000373474 PPP4R1Q8TF05 950 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 P2RX5Q93086 422 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 RAB20Q9NX57 234 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 CDC42BPBQ9Y5S2 1711 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 DAPK3O43293 454 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 LRRC47Q8N1G4 583 aaKnown RBP15.53■□□□□ 0.08
LMX1B-202ENST00000373474 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 DPH5Q9H2P9 285 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 SPTLC3Q9NUV7 552 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 COL4A3BPQ9Y5P4 624 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 CCDC93Q567U6 631 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 CHURC1Q8WUH1 139 aa15.53■□□□□ 0.08
LMX1B-202ENST00000373474 PRAMEF22A3QJZ6 481 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 MYL1P05976 194 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 SLFN14P0C7P3 912 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 TNNI1P19237 187 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 FAM102BQ5T8I3 360 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 CCDC13Q8IYE1 715 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 RUNDC3BQ96NL0 473 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 GTF2IP78347 998 aa15.52■□□□□ 0.08
LMX1B-202ENST00000373474 A0A087WUV0 522 aaPredicted RBP15.52■□□□□ 0.07
LMX1B-202ENST00000373474 K7ENM7 598 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 NOP56O00567 594 aaKnown RBP15.52■□□□□ 0.07
LMX1B-202ENST00000373474 BAG2O95816 211 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 H2AFZP0C0S5 128 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 ALDH1B1P30837 517 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 PDE6CP51160 858 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 TMCO4Q5TGY1 634 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 H2AFVQ71UI9 128 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.52■□□□□ 0.07
LMX1B-202ENST00000373474 RNF8O76064 485 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 INPP1P49441 399 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 PTPN12Q05209 780 aaKnown RBP15.52■□□□□ 0.07
LMX1B-202ENST00000373474 VTI1AQ96AJ9 217 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 DACT3Q96B18 629 aaPredicted RBP15.52■□□□□ 0.07
LMX1B-202ENST00000373474 PANX2Q96RD6 677 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 AZI2Q9H6S1 392 aa15.52■□□□□ 0.07
LMX1B-202ENST00000373474 TYW1Q9NV66 732 aaKnown RBP15.52■□□□□ 0.07
LMX1B-202ENST00000373474 SRPRBQ9Y5M8 271 aaKnown RBP15.52■□□□□ 0.07
LMX1B-202ENST00000373474 H0YIN7 160 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 KRT3P12035 628 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 PHBP35232 272 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 GUCY2DQ02846 1103 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 RNASELQ05823 741 aaKnown RBP15.51■□□□□ 0.07
LMX1B-202ENST00000373474 CXorf38Q8TB03 319 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ENC1O14682 589 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 POLR2MP0CAP2 368 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 RSPH3Q86UC2 560 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 NLRX1Q86UT6 975 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 CPXCR1Q8N123 301 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 DRC3Q9H069 523 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 PUS7LQ9H0K6 701 aaKnown RBP15.51■□□□□ 0.07
LMX1B-202ENST00000373474 A0A087WWV3 80 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 SOWAHDA6NJG2 315 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ADCY8P40145 1251 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 SARM1Q6SZW1 724 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 SMYD4Q8IYR2 804 aaPredicted RBP15.51■□□□□ 0.07
LMX1B-202ENST00000373474 GRAMD1CQ8IYS0 662 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 LARP4BQ92615 738 aaKnown RBP15.51■□□□□ 0.07
LMX1B-202ENST00000373474 OSBP2Q969R2 916 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 KRT12Q99456 494 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 THAP9Q9H5L6 903 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ROBO2Q9HCK4 1378 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 SASH1O94885 1247 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 EPHB4P54760 987 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 EXOC3L4Q17RC7 722 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ANKRD20A4Q4UJ75 823 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ANKRD20A8PQ5CZ79 823 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ANKRD20A2Q5SQ80 823 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ANKRD20A1Q5TYW2 823 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 RNF34Q969K3 372 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 CDC42BPAQ5VT25 1732 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 PRPF6O94906 941 aaKnown RBP15.51■□□□□ 0.07
LMX1B-202ENST00000373474 CLTAP09496 248 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 POLD1P28340 1107 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 ARHGEF25Q86VW2 580 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 FBXO11Q86XK2 927 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 MORC4Q8TE76 937 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.51■□□□□ 0.07
LMX1B-202ENST00000373474 RSAD2Q8WXG1 361 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
LMX1B-202ENST00000373474 UNC13BO14795 1591 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 CFAP61Q8NHU2 1237 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 TEKT3Q9BXF9 490 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 MRPL11Q9Y3B7 192 aaKnown RBP15.5■□□□□ 0.07
LMX1B-202ENST00000373474 KRT19P08727 400 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 ZKSCAN8Q15776 578 aaPredicted RBP15.5■□□□□ 0.07
LMX1B-202ENST00000373474 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
LMX1B-202ENST00000373474 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 NLRP7Q8WX94 980 aa15.5■□□□□ 0.07
LMX1B-202ENST00000373474 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.5■□□□□ 0.07
LMX1B-202ENST00000373474 PRPF3O43395 683 aaKnown RBP15.5■□□□□ 0.07
LMX1B-202ENST00000373474 CD19P15391 556 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms