RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 BTDP43251 543 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 PDE1BQ01064 536 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 ANKRD20A8PQ5CZ79 823 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 ANKRD20A2Q5SQ80 823 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 ANKRD20A1Q5TYW2 823 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 STAG1Q8WVM7 1258 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
VCL-202ENST00000372755 PPME1Q9Y570 386 aa12.58□□□□□ -0.4
VCL-202ENST00000372755 KAZNQ674X7 775 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
VCL-202ENST00000372755 THEGQ9P2T0 379 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ZMYM4Q5VZL5 1548 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ARHGEF12Q9NZN5 1544 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 XPAP23025 273 aaPredicted RBP12.57□□□□□ -0.4
VCL-202ENST00000372755 MAP2K2P36507 400 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ZNF449Q6P9G9 518 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 MICAL1Q8TDZ2 1067 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ZMYM3Q14202 1370 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 GAP43P17677 238 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 POLA2Q14181 598 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 TRIM68Q6AZZ1 485 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ANKRD36BP1Q96IX9 119 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 DISC1Q9NRI5 854 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 SPECC1L-ADORA2AF8WAN1 911 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 MYO1FO00160 1098 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
VCL-202ENST00000372755 SUN1O94901 812 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 APBA3O96018 575 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ABCD1P33897 745 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 ATP10BO94823 1461 aa12.57□□□□□ -0.4
VCL-202ENST00000372755 COL17A1Q9UMD9 1497 aaPredicted RBP12.57□□□□□ -0.4
VCL-202ENST00000372755 TMEM232C9JQI7 657 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 BAG6P46379 1132 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 EXOC8Q8IYI6 725 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 CMTR1Q8N1G2 835 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
VCL-202ENST00000372755 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 PCDHB4Q9Y5E5 795 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 EPN1Q9Y6I3 576 aaPredicted RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 KRT10P13645 584 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 COPB1P53618 953 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 HSP90AA5PQ58FG0 334 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 TTBK2Q6IQ55 1244 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 SYMPKQ92797 1274 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 SPDL1Q96EA4 605 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 HSPD1P10809 573 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 RAPH1Q70E73 1250 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 METTL23Q86XA0 190 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 FAM170AA1A519 330 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 SORBS3O60504 671 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 KPNA2P52292 529 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 ETF1P62495 437 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 ZBTB38Q8NAP3 1195 aaPredicted RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 TMEM63CQ9P1W3 806 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 SYNJ2BP-COX16A0A087WUM0 186 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 HSPA8P11142 646 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 PHEXP78562 749 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 COX16Q9P0S2 106 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 SGK1O00141 431 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 ADAT2Q7Z6V5 191 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 WHAMMQ8TF30 809 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 CNOT6LQ96LI5 555 aaKnown RBP12.56□□□□□ -0.4
VCL-202ENST00000372755 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 FANCLQ9NW38 375 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 NUB1Q9Y5A7 615 aa12.56□□□□□ -0.4
VCL-202ENST00000372755 ADCY9O60503 1353 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 GYG1P46976 350 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 TRAPPC10P48553 1259 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 TSTA3Q13630 321 aaPredicted RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 IQCB1Q15051 598 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 RNF168Q8IYW5 571 aaPredicted RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 BCAS4Q8TDM0 211 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 CHMP6Q96FZ7 201 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 TTC1Q99614 292 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 ZNF233A6NK53 670 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 GOLGA8HP0CJ92 632 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 PSMC2P35998 433 aaKnown RBP12.55□□□□□ -0.4
VCL-202ENST00000372755 HSPA2P54652 639 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 CCNA1P78396 465 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 KCTD2Q14681 263 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 LRRC8AQ8IWT6 810 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 SSH3Q8TE77 659 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 SDR42E1Q8WUS8 393 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 AMNQ9BXJ7 453 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 PCDHA7Q9UN72 937 aa12.55□□□□□ -0.4
VCL-202ENST00000372755 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms