RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 GPR37L1O60883 481 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 ALDH1L1O75891 902 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 IL33O95760 270 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 STT3AP46977 705 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 COPAP53621 1224 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 EIF4G2P78344 907 aaKnown RBP eCLIP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 ZNF211Q13398 564 aaPredicted RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 ZNF34Q8IZ26 560 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 DCLK2Q8N568 766 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 NFATC2IPQ8NCF5 419 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 EXOC4Q96A65 974 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 WNK4Q96J92 1243 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 DHRS1Q96LJ7 313 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 IQCGQ9H095 443 aaKnown RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 NGRNQ9NPE2 291 aaKnown RBP5.72□□□□□ -1.49
UBE3D-202ENST00000369746 FANCLQ9NW38 375 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 SEL1LQ9UBV2 794 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 CFAP45Q9UL16 551 aa5.72□□□□□ -1.49
UBE3D-202ENST00000369746 PRRT4C9JH25 899 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 MAP3K7O43318 606 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 CDKL5O76039 1030 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 VCAM1P19320 739 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 DNAJB2P25686 324 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 PPM1FP49593 454 aaPredicted RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 CORO7P57737 925 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 GRAPQ13588 217 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 DCTN1Q14203 1278 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 CFAP58Q5T655 872 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 C15orf52Q6ZUT6 534 aaKnown RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 SDCCAG8Q86SQ7 713 aaPredicted RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 MYLK4Q86YV6 388 aaPredicted RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 ERC1Q8IUD2 1116 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 BRSK2Q8IWQ3 736 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 MICALL2Q8IY33 904 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 C10orf67Q8IYJ2 551 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 IFNL3Q8IZI9 196 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 GRAPLQ8TC17 118 aaPredicted RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 RMDN2Q96LZ7 410 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 TTC14Q96N46 770 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 UBXN6Q9BZV1 441 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 SPATS2LQ9NUQ6 558 aaKnown RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 C6orf203Q9P0P8 240 aaPredicted RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 ZMAT5Q9UDW3 170 aaKnown RBP5.71□□□□□ -1.49
UBE3D-202ENST00000369746 TSKSQ9UJT2 592 aa5.71□□□□□ -1.49
UBE3D-202ENST00000369746 PDE4DIPQ5VU43 2346 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 F8W031 263 aaPredicted RBP5.71□□□□□ -1.5
UBE3D-202ENST00000369746 SNRPA1P09661 255 aaKnown RBP5.71□□□□□ -1.5
UBE3D-202ENST00000369746 GTF2A2P52657 109 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 PRPF4BQ13523 1007 aaKnown RBP5.71□□□□□ -1.5
UBE3D-202ENST00000369746 TTF1Q15361 905 aaPredicted RBP5.71□□□□□ -1.5
UBE3D-202ENST00000369746 SF3B3Q15393 1217 aaKnown RBP5.71□□□□□ -1.5
UBE3D-202ENST00000369746 SUPT20HL1Q3ZLR7 823 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 SLC9C1Q4G0N8 1177 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 PACS2Q86VP3 889 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 SPICE1Q8N0Z3 855 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 PPHLN1Q8NEY8 458 aaKnown RBP5.71□□□□□ -1.5
UBE3D-202ENST00000369746 GPT2Q8TD30 523 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 HPS3Q969F9 1004 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 HOMER3Q9NSC5 361 aa5.71□□□□□ -1.5
UBE3D-202ENST00000369746 MAP3K15Q6ZN16 1313 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 KRT38O76015 456 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 GCFC2P16383 781 aaKnown RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 POU3F3P20264 500 aaPredicted RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 RPS6KA3P51812 740 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 MRPL12P52815 198 aaKnown RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 TAF7Q15545 349 aaPredicted RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 AAK1Q2M2I8 961 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 ZNF790Q6PG37 636 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 TMEM110Q86TL2 294 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 NCAPG2Q86XI2 1143 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 ANKRD18AQ8IVF6 992 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 KCT2Q8NC54 265 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 CCDC191Q8NCU4 936 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 KIAA1524Q8TCG1 905 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 BHMTQ93088 406 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 MRFAP1L1Q96HT8 127 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 AP1M1Q9BXS5 423 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 SCHIP1Q9P0W5 487 aaPredicted RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 BLOC1S6Q9UL45 172 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 TPCN1Q9ULQ1 816 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 NOB1Q9ULX3 412 aaKnown RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 IPPQ9Y573 584 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 LTBP2Q14767 1821 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 PTPRCP08575 1304 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 SGTAO43765 313 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 FGFR1OPO95684 399 aaKnown RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 MAPK1P28482 360 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 NOS2P35228 1153 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 PAK2Q13177 524 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 NEDD9Q14511 834 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 ZSCAN23Q3MJ62 389 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 IRGCQ6NXR0 463 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 RSBN1LQ6PCB5 846 aaPredicted RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 LVRNQ6Q4G3 990 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 ARMC2Q8NEN0 867 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 NACC2Q96BF6 587 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 TIFAQ96CG3 184 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 HAUS7Q99871 368 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms