RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TRIM37O94972 964 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 RINT1Q6NUQ1 792 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 SLFN12Q8IYM2 578 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 SLC5A4Q9NY91 659 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 ARMCX3Q9UH62 379 aaPredicted RBP19.84■□□□□ 0.77
SNX27-202ENST00000368841 RNF40O75150 1001 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 DSCC1Q9BVC3 393 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 GSPT1P15170 499 aaKnown RBP19.84■□□□□ 0.77
SNX27-202ENST00000368841 RNASELQ05823 741 aaKnown RBP19.84■□□□□ 0.77
SNX27-202ENST00000368841 NLRP7Q8WX94 980 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 ZNF577Q9BSK1 485 aa19.84■□□□□ 0.77
SNX27-202ENST00000368841 S100BP04271 92 aaPredicted RBP19.83■□□□□ 0.77
SNX27-202ENST00000368841 COG7P83436 770 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 RAB3IPQ96QF0 476 aaPredicted RBP19.83■□□□□ 0.77
SNX27-202ENST00000368841 TSKSQ9UJT2 592 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 ACTN1P12814 892 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 CCDC38Q502W7 563 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 PRPF38AQ8NAV1 312 aaKnown RBP19.83■□□□□ 0.77
SNX27-202ENST00000368841 CFAP61Q8NHU2 1237 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 FAM71BQ8TC56 605 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 HSPD1P10809 573 aaKnown RBP19.83■□□□□ 0.77
SNX27-202ENST00000368841 GRK7Q8WTQ7 553 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 HAUS1Q96CS2 278 aa19.83■□□□□ 0.77
SNX27-202ENST00000368841 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.83■□□□□ 0.77
SNX27-202ENST00000368841 PHKA1P46020 1223 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 DPY19L2Q6NUT2 758 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 ABI1Q8IZP0 508 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 F5H423 210 aaPredicted RBP19.83■□□□□ 0.76
SNX27-202ENST00000368841 SCG2P13521 617 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 FANCBQ8NB91 859 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 GBP5Q96PP8 586 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 TBK1Q9UHD2 729 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 A0A1B0GUA9 196 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 PDE6AP16499 860 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 GUCY2DQ02846 1103 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 SCRN1Q12765 414 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 MAIP1Q8WWC4 291 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 EXT2Q93063 718 aa19.83■□□□□ 0.76
SNX27-202ENST00000368841 PRPSAP1Q14558 356 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 CNOT6LQ96LI5 555 aaKnown RBP19.82■□□□□ 0.76
SNX27-202ENST00000368841 MAPKBP1O60336 1514 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 XPAP23025 273 aaPredicted RBP19.82■□□□□ 0.76
SNX27-202ENST00000368841 ODR4Q5SWX8 454 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 LRCH2Q5VUJ6 765 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 LRFN2Q9ULH4 789 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 HYOU1Q9Y4L1 999 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 CLTAP09496 248 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 CD58P19256 250 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 ADCY9O60503 1353 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 WDR91A4D1P6 747 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 ANLNQ9NQW6 1124 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 KIAA1468Q9P260 1216 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 TSR3Q9UJK0 312 aaKnown RBP19.82■□□□□ 0.76
SNX27-202ENST00000368841 NUB1Q9Y5A7 615 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 UHRF1BP1Q6BDS2 1440 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 ZNF518AQ6AHZ1 1483 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 HS1BP3Q53T59 392 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 ATP6V1E2Q96A05 226 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
SNX27-202ENST00000368841 UGGT2Q9NYU1 1516 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 HNRNPDLO14979 420 aaKnown RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 ZKSCAN8Q15776 578 aaPredicted RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 DBN1Q16643 649 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 MUM1L1Q5H9M0 696 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 HABP4Q5JVS0 413 aaKnown RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 ZBTB41Q5SVQ8 909 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 GDAP1Q8TB36 358 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 LRGUKQ96M69 825 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 KLHL14Q9P2G3 628 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 FGAP02671 866 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 EEF1GP26641 437 aaKnown RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 MYRIPQ8NFW9 859 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 RASSF2P50749 326 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 TMED2Q15363 201 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 UBE2SQ16763 222 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 CCDC93Q567U6 631 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 TBC1D22AQ8WUA7 517 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 CSRNP1Q96S65 589 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 TEX14Q8IWB6 1497 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 INO80B-WBP1J3KQ70 363 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 INO80BQ9C086 356 aaPredicted RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 IFT122Q9HBG6 1241 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 INTUQ9ULD6 942 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 COL17A1Q9UMD9 1497 aaPredicted RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 FAM149B1Q96BN6 582 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 DNAJC17Q9NVM6 304 aaKnown RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 PCDHA1Q9Y5I3 950 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 TUBBP07437 444 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 INPP1P49441 399 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 COA7Q96BR5 231 aa19.81■□□□□ 0.76
SNX27-202ENST00000368841 NXF1Q9UBU9 619 aaKnown RBP19.81■□□□□ 0.76
SNX27-202ENST00000368841 TRIM58Q8NG06 486 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNX27-202ENST00000368841 LIG3P49916 1009 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 CCDC84Q86UT8 332 aaPredicted RBP19.8■□□□□ 0.76
SNX27-202ENST00000368841 NVLO15381 856 aaKnown RBP19.8■□□□□ 0.76
SNX27-202ENST00000368841 TUBB2AQ13885 445 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 RSRC2Q7L4I2 434 aaKnown RBP19.8■□□□□ 0.76
SNX27-202ENST00000368841 OR8K1Q8NGG5 319 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 TUBB2BQ9BVA1 445 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms