RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 PUS7LQ9H0K6 701 aaKnown RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 NOC2LQ9Y3T9 749 aaKnown RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 A0A087WUV0 522 aaPredicted RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 PNMA6FA0A0J9YX94 578 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 CCDC169A6NNP5 214 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 TRAF5O00463 557 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 TADA3O75528 432 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 RPS6KA4O75676 772 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 TTLL1O95922 423 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 PHKA1P46020 1223 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 CRKLP46109 303 aaKnown RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 RHOT2Q8IXI1 618 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 COA1Q9GZY4 146 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 ZHX3Q9H4I2 956 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 PIH1D3Q9NQM4 214 aaKnown RBP8.04□□□□□ -1.12
VTA1-202ENST00000367630 ABHD10Q9NUJ1 306 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 NARFQ9UHQ1 456 aa8.04□□□□□ -1.12
VTA1-202ENST00000367630 KLHL30Q0D2K2 578 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 NR1I3Q14994 352 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 WDR93Q6P2C0 686 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 DHX38Q92620 1227 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 CNOT6LQ96LI5 555 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 CEP83Q9Y592 693 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 RASSF2P50749 326 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 RASA3Q14644 834 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 GBP7Q8N8V2 638 aaPredicted RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 PHKBQ93100 1093 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 ZSWIM5Q9P217 1185 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 ATP6V0A2Q9Y487 856 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 EVI5O60447 810 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 XRCC5P13010 732 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 SLC27A3Q5K4L6 730 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 FAM26FQ5R3K3 315 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 HVCN1Q96D96 273 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 BARHL2Q9NY43 387 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 NSFL1CQ9UNZ2 370 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 TJP1Q07157 1748 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 P4HA2O15460 535 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 TNFAIP3P21580 790 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 ADD1P35611 737 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 DPYDQ12882 1025 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 ARHGAP24Q8N264 748 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 MYBPC2Q14324 1141 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 KARSQ15046 597 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 NAALADL2Q58DX5 795 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 TAB2Q9NYJ8 693 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 DDX25Q9UHL0 483 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 PNMA6AP0CW24 399 aaPredicted RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 PPP4CP60510 307 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 ZSCAN26Q16670 478 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 EDRF1Q3B7T1 1238 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 EPHA10Q5JZY3 1008 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 KRT39Q6A163 491 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 CC2D1AQ6P1N0 951 aaPredicted RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 APLFQ8IW19 511 aaPredicted RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 ZSCAN29Q8IWY8 852 aaPredicted RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 MAP3K20Q9NYL2 800 aaKnown RBP8.03□□□□□ -1.12
VTA1-202ENST00000367630 TMOD4Q9NZQ9 345 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 ARFGEF2Q9Y6D5 1785 aa8.03□□□□□ -1.12
VTA1-202ENST00000367630 SURF1Q15526 300 aa8.02□□□□□ -1.12
VTA1-202ENST00000367630 LETM2Q2VYF4 491 aa8.02□□□□□ -1.12
VTA1-202ENST00000367630 FOXP4Q8IVH2 680 aaPredicted RBP8.02□□□□□ -1.12
VTA1-202ENST00000367630 MOV10L1Q9BXT6 1211 aaKnown RBP8.02□□□□□ -1.12
VTA1-202ENST00000367630 IFT122Q9HBG6 1241 aa8.02□□□□□ -1.12
VTA1-202ENST00000367630 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.12
VTA1-202ENST00000367630 ARMCX3Q9UH62 379 aaPredicted RBP8.02□□□□□ -1.12
VTA1-202ENST00000367630 FAM187AA6NFU0 413 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 SMAPO00193 183 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 TNFRSF8P28908 595 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 CLCN6P51797 869 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 RBL2Q08999 1139 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 RASGRF1Q13972 1273 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 ENOSF1Q7L5Y1 443 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 MIGA1Q8NAN2 632 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 CCDC85AQ96PX6 553 aaPredicted RBP8.02□□□□□ -1.13
VTA1-202ENST00000367630 RAB3IPQ96QF0 476 aaPredicted RBP8.02□□□□□ -1.13
VTA1-202ENST00000367630 SEC62Q99442 399 aaKnown RBP8.02□□□□□ -1.13
VTA1-202ENST00000367630 KANSL2Q9H9L4 492 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 ADGRG1Q9Y653 693 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 ADORA1P30542 326 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 MCM6Q14566 821 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 OTUD6AQ7L8S5 288 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 CHST3Q7LGC8 479 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 FRMD5Q7Z6J6 570 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 TBC1D10CQ8IV04 446 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 KCNF1Q9H3M0 494 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 FXR2P51116 673 aaKnown RBP eCLIP8.02□□□□□ -1.13
VTA1-202ENST00000367630 NPEPPSP55786 919 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 SETDB1Q15047 1291 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 MSL1Q68DK7 614 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 CDHR1Q96JP9 859 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 VPS16Q9H269 839 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 KIAA1586Q9HCI6 787 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 PANK4Q9NVE7 773 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 PARP3Q9Y6F1 533 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.02□□□□□ -1.13
VTA1-202ENST00000367630 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms