RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 BCAMP50895 628 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 WHAMMP3Q1A5X7 153 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 ZNF772Q68DY9 489 aaPredicted RBP17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 NT5C1BQ96P26 610 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 PCDHA1Q9Y5I3 950 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 ATP10BO94823 1461 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 ARPP19P56211 112 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 LMNB2Q03252 620 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 GPKOWQ92917 476 aaPredicted RBP eCLIP17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 ZNF148Q9UQR1 794 aa17.14■□□□□ 0.33
NUCKS1-201ENST00000367142 CASP2P42575 452 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 POLR2FP61218 127 aaKnown RBP17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 ASPHQ12797 758 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 Q3C1V9 767 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 LRCH2Q5VUJ6 765 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 RAPH1Q70E73 1250 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 ZNF577Q9BSK1 485 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 GTPBP6O43824 516 aaPredicted RBP17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 PPFIA2O75334 1257 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 PDE6AP16499 860 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 MAGEF1Q9HAY2 307 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 ABT1Q9ULW3 272 aaKnown RBP17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 YWHAGP61981 247 aaKnown RBP eCLIP17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 PPP1R2P3Q6NXS1 205 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 CPSF2Q9P2I0 782 aaKnown RBP17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 FAN1Q9Y2M0 1017 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 STX1BP61266 288 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 MYSM1Q5VVJ2 828 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 NLRP7Q8WX94 980 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 WDR64B1ANS9 1081 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 GUCY2FP51841 1108 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 ASPRV1Q53RT3 343 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 ODR4Q5SWX8 454 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 TTBK2Q6IQ55 1244 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 CAPN12Q6ZSI9 719 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 TRIML1Q8N9V2 468 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
NUCKS1-201ENST00000367142 JAK2O60674 1132 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 CLNS1AP54105 237 aaKnown RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 FAM81BQ96LP2 452 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 VPS41P49754 854 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 FAM26FQ5R3K3 315 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 PFKFB1P16118 471 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 MYLK4Q86YV6 388 aaPredicted RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 SMYD2Q9NRG4 433 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 LEMD3Q9Y2U8 911 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 CLRN2A0PK11 232 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 GAP43P17677 238 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 GPATCH4Q5T3I0 446 aaKnown RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 ADALQ6DHV7 355 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 QTRT2Q9H974 415 aaKnown RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 BZW2Q9Y6E2 419 aaKnown RBP17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 NFKBIAP25963 317 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 ELF1P32519 619 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 MCUQ8NE86 351 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 CDHR1Q96JP9 859 aa17.12■□□□□ 0.33
NUCKS1-201ENST00000367142 GANCQ8TET4 914 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 PNMA6EA0A0J9YXQ4 647 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 BUB1O43683 1085 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 PDE1BQ01064 536 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 PDZD8Q8NEN9 1154 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 DDX17Q92841 729 aaKnown RBP17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 ACCSQ96QU6 501 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 CSPG5O95196 566 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 H2AFZP0C0S5 128 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 IREB2P48200 963 aaKnown RBP17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 PPARDQ03181 441 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 H2AFVQ71UI9 128 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 RABEP2Q9H5N1 569 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 MED7O43513 233 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 PLEKHA4Q9H4M7 779 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 KMT5AQ9NQR1 393 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 SMIM24O75264 130 aa17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 RPN1P04843 607 aaKnown RBP17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 TAB3Q8N5C8 712 aaPredicted RBP17.11■□□□□ 0.33
NUCKS1-201ENST00000367142 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 FAM149B1Q96BN6 582 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 RXRBP28702 533 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 KPNA2P52292 529 aaKnown RBP17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 IL1RL1Q01638 556 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 MUM1Q2TAK8 710 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 C1orf228Q6PIY5 440 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 DCLK2Q8N568 766 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 STK38LQ9Y2H1 464 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 M0R2C6 588 aa17.1■□□□□ 0.33
NUCKS1-201ENST00000367142 LAD1O00515 517 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms