RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 TAL1P17542 331 aaPredicted RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 TDRD12Q587J7 1177 aaKnown RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 PRR5LQ6MZQ0 368 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 SV2BQ7L1I2 683 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 TRMT1LQ7Z2T5 733 aaKnown RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 PYM1Q9BRP8 204 aaKnown RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 SMARCAL1Q9NZC9 954 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 REXO2Q9Y3B8 237 aaKnown RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 PALM3A6NDB9 673 aaPredicted RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 SLC37A4O43826 429 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 KLRC4O43908 158 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 SERPINB2P05120 415 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 ARHGAP25P42331 645 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 RRAGAQ7L523 313 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 RABEP2Q9H5N1 569 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 ANKZF1Q9H8Y5 726 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 FLT1P17948 1338 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 UTRNP46939 3433 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 CHD4Q14839 1912 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 H3BQF6 201 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 KRT18P05783 430 aaKnown RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 SPA17Q15506 151 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 SHROOM1Q2M3G4 852 aaPredicted RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 CACNA2D4Q7Z3S7 1137 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 KRT25Q7Z3Z0 450 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 MMS19Q96T76 1030 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 DUSP9Q99956 384 aaKnown RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 RTFDC1Q9BY42 306 aaPredicted RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 FUT8Q9BYC5 575 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 NHEJ1Q9H9Q4 299 aaPredicted RBP9.23□□□□□ -0.93
CD46-205ENST00000358170 POLLQ9UGP5 575 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 LEMD3Q9Y2U8 911 aa9.23□□□□□ -0.93
CD46-205ENST00000358170 DOT1LQ8TEK3 1739 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.22□□□□□ -0.93
CD46-205ENST00000358170 A0A0U1RQG5 324 aaPredicted RBP9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 APBA1Q02410 837 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 HSP90B2PQ58FF3 399 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 TTI2Q6NXR4 508 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP17L6PQ6QN14 398 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 CCDC51Q96ER9 411 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 MKRN1Q9UHC7 482 aaKnown RBP9.22□□□□□ -0.93
CD46-205ENST00000358170 MYH8P13535 1937 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 MYMKA6NI61 221 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 TRAF5O00463 557 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 ERLIN1O75477 346 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 DNM2P50570 870 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 WDR59Q6PJI9 974 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 BARGINQ6ZT62 677 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 GIMAP8Q8ND71 665 aaPredicted RBP9.22□□□□□ -0.93
CD46-205ENST00000358170 MLXIPQ9HAP2 919 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 USP40Q9NVE5 1235 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 KBTBD4Q9NVX7 518 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 BCL9LQ86UU0 1499 aa9.22□□□□□ -0.93
CD46-205ENST00000358170 NPHP3-ACAD11A0A0J9YXS1 232 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 LRRC10BA6NIK2 292 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 EPHB6O15197 1021 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 BUB1O43683 1085 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 CCNE1P24864 410 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 CYLC1P35663 651 aaPredicted RBP9.21□□□□□ -0.93
CD46-205ENST00000358170 ADCY7P51828 1080 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 HNRNPH2P55795 449 aaKnown RBP9.21□□□□□ -0.93
CD46-205ENST00000358170 HERVK_113P62684 666 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 AMPD3Q01432 767 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 KIF5AQ12840 1032 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 TMEM266Q2M3C6 531 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 CCDC40Q4G0X9 1142 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 KRT79Q5XKE5 535 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 TMC4Q7Z404 712 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 KCNK18Q7Z418 384 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 RIN2Q8WYP3 895 aaPredicted RBP9.21□□□□□ -0.93
CD46-205ENST00000358170 LRRC4BQ9NT99 713 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 EHD2Q9NZN4 543 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 SAR1BQ9Y6B6 198 aa9.21□□□□□ -0.93
CD46-205ENST00000358170 USP17L10C9JJH3 530 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 KRT86O43790 486 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 RHOBTB3O94955 611 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 SLC30A10Q6XR72 485 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 KIAA0825Q8IV33 1275 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 NEDD1Q8NHV4 660 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.21□□□□□ -0.94
CD46-205ENST00000358170 ZC3H12CQ9C0D7 883 aaKnown RBP9.21□□□□□ -0.94
CD46-205ENST00000358170 ZMYND12Q9H0C1 365 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 SH3GLB2Q9NR46 395 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 FAN1Q9Y2M0 1017 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 PCDHAC2Q9Y5I4 1007 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 DUOX1Q9NRD9 1551 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 CNTNAP4Q9C0A0 1308 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 CCDC66A2RUB6 948 aa9.21□□□□□ -0.94
CD46-205ENST00000358170 CCDC151A5D8V7 595 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms