RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ASNSP08243 561 aa11.38□□□□□ -0.59
SYNE1-203ENST00000354674 KIF23Q02241 960 aaPredicted RBP11.38□□□□□ -0.59
SYNE1-203ENST00000354674 GPATCH4Q5T3I0 446 aaKnown RBP11.38□□□□□ -0.59
SYNE1-203ENST00000354674 DCAF15Q66K64 600 aa11.38□□□□□ -0.59
SYNE1-203ENST00000354674 CC2D1AQ6P1N0 951 aaPredicted RBP11.38□□□□□ -0.59
SYNE1-203ENST00000354674 PLA2G4DQ86XP0 818 aa11.38□□□□□ -0.59
SYNE1-203ENST00000354674 CENPHQ9H3R5 247 aa11.38□□□□□ -0.59
SYNE1-203ENST00000354674 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
SYNE1-203ENST00000354674 MMP1P03956 469 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 GOLGA8HP0CJ92 632 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 SCG2P13521 617 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 AKAP17AQ02040 695 aaKnown RBP11.37□□□□□ -0.59
SYNE1-203ENST00000354674 GUCY1B3Q02153 619 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 CREBRFQ8IUR6 639 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 GDAP1L1Q96MZ0 367 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 PHF20Q9BVI0 1012 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 ZNF341Q9BYN7 854 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 ARFGAP3Q9NP61 516 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 SH3GLB2Q9NR46 395 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 EPHX2P34913 555 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 CCZ1BP86790 482 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-203ENST00000354674 E4F1Q66K89 784 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-203ENST00000354674 C11orf57Q6ZUT1 292 aaPredicted RBP11.37□□□□□ -0.59
SYNE1-203ENST00000354674 MTMR8Q96EF0 704 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
SYNE1-203ENST00000354674 POLR2AP24928 1970 aaKnown RBP11.37□□□□□ -0.59
SYNE1-203ENST00000354674 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 F5H6K3 240 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 NR1I2O75469 434 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 SMC2O95347 1197 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 KLRC3Q07444 240 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 ATL3Q6DD88 541 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 BRAPQ7Z569 592 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 H0YHG0 523 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 PEX19P40855 299 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 SARNPP82979 210 aaKnown RBP11.36□□□□□ -0.59
SYNE1-203ENST00000354674 TRIM29Q14134 588 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 NPY5RQ15761 445 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 HINFPQ9BQA5 517 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-203ENST00000354674 CD248Q9HCU0 757 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 IQCA1LA6NCM1 817 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-203ENST00000354674 HNRNPH1P31943 449 aaKnown RBP11.36□□□□□ -0.59
SYNE1-203ENST00000354674 SUPT20HL1Q3ZLR7 823 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 DCPSQ96C86 337 aaKnown RBP11.36□□□□□ -0.59
SYNE1-203ENST00000354674 KLRG1Q96E93 195 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 PARD6BQ9BYG5 372 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 FOXP1Q9H334 677 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-203ENST00000354674 MED4Q9NPJ6 270 aa11.36□□□□□ -0.59
SYNE1-203ENST00000354674 FRMPD2Q68DX3 1309 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-203ENST00000354674 hCG_1642624A0A1W2PR95 340 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 ERLIN2O94905 339 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 NDUFB10O96000 172 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
SYNE1-203ENST00000354674 XBP1P17861 261 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 ECE1P42892 770 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 NOL9Q5SY16 702 aaKnown RBP11.35□□□□□ -0.59
SYNE1-203ENST00000354674 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 TMC6Q7Z403 805 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 ACER1Q8TDN7 264 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 CLIC6Q96NY7 704 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 PUF60Q9UHX1 559 aaKnown RBP11.35□□□□□ -0.59
SYNE1-203ENST00000354674 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 GSCP56915 257 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-203ENST00000354674 CORO7P57737 925 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 KIAA1755Q5JYT7 1200 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 GBP6Q6ZN66 633 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 TADA2BQ86TJ2 420 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 N4BP2L2Q92802 583 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-203ENST00000354674 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 VPS54Q9P1Q0 977 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
SYNE1-203ENST00000354674 MAP9Q49MG5 647 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 HSP90AA4PQ58FG1 418 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 LRRC31Q6UY01 552 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 SCYL3Q8IZE3 742 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 EXOC4Q96A65 974 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 UBA5Q9GZZ9 404 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 CPVLQ9H3G5 476 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 SH2D4AQ9H788 454 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 BARHL2Q9NY43 387 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.34□□□□□ -0.59
SYNE1-203ENST00000354674 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 ELP1O95163 1332 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 hCG_1984214I3L0E3 225 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 STXBP3O00186 592 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 PLA2G6O60733 806 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 IVLP07476 585 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 TPM1P09493 284 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 INPP5BP32019 993 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 SLC1A4P43007 532 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 KRT85P78386 507 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 TTBK2Q6IQ55 1244 aa11.34□□□□□ -0.59
SYNE1-203ENST00000354674 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms