RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 SALL4Q9UJQ4 1053 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 SPDYE3A6NKU9 549 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 HMGB1P1B2RPK0 211 aaPredicted RBP17.93■□□□□ 0.46
MBD1-204ENST00000347968 NEFHP12036 1026 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 SLC5A9Q2M3M2 681 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 IFT20Q8IY31 132 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 CCDC170Q8IYT3 715 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 LINS1Q8NG48 757 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 SYMPKQ92797 1274 aaKnown RBP17.93■□□□□ 0.46
MBD1-204ENST00000347968 MYD88Q99836 296 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 SLC5A4Q9NY91 659 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 SLC12A6Q9UHW9 1150 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 TNS3Q68CZ2 1445 aa17.93■□□□□ 0.46
MBD1-204ENST00000347968 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 MAGOHP61326 146 aaKnown RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 GLE1Q53GS7 698 aaKnown RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 PPP4R3AQ6IN85 833 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 MAGOHBQ96A72 148 aaKnown RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 TMEM165Q9HC07 324 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 TMBIM4Q9HC24 238 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 LIMA1Q9UHB6 759 aaKnown RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 CORO1CQ9ULV4 474 aaPredicted RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 ALS2Q96Q42 1657 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 DNAJC8O75937 253 aaPredicted RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 RTN3O95197 1032 aaPredicted RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 CYLC1P35663 651 aaPredicted RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 CDC37Q16543 378 aaPredicted RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 SPATA20Q8TB22 786 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 L3MBTL3Q96JM7 780 aaPredicted RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 HELLSQ9NRZ9 838 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 ERICH2A1L162 156 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 B4E1Z4 1266 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 NKRFO15226 690 aaKnown RBP eCLIP17.92■□□□□ 0.46
MBD1-204ENST00000347968 TACC1O75410 805 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 PMS1P54277 932 aaKnown RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 MB21D1Q8N884 522 aa17.92■□□□□ 0.46
MBD1-204ENST00000347968 UBLCP1Q8WVY7 318 aaPredicted RBP17.92■□□□□ 0.46
MBD1-204ENST00000347968 ANO9A1A5B4 782 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 CCT8L1PA6NM43 557 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 GOLGA8AA7E2F4 631 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 WNT7AO00755 349 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 ECEL1O95672 775 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 PARP1P09874 1014 aaKnown RBP17.91■□□□□ 0.46
MBD1-204ENST00000347968 ALDH5A1P51649 535 aaPredicted RBP17.91■□□□□ 0.46
MBD1-204ENST00000347968 AMOTQ4VCS5 1084 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 CWF19L1Q69YN2 538 aaKnown RBP17.91■□□□□ 0.46
MBD1-204ENST00000347968 DRAXINQ8NBI3 349 aaPredicted RBP17.91■□□□□ 0.46
MBD1-204ENST00000347968 SLC17A8Q8NDX2 589 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 NDST4Q9H3R1 872 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 CD2APQ9Y5K6 639 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 DCCP43146 1447 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
MBD1-204ENST00000347968 LRRC37A3O60309 1634 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 RFX7Q2KHR2 1363 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 SMIM23A6NLE4 172 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 PTCD1O75127 700 aaKnown RBP17.91■□□□□ 0.46
MBD1-204ENST00000347968 CTNNA1P35221 906 aaKnown RBP17.91■□□□□ 0.46
MBD1-204ENST00000347968 SCNN1BP51168 640 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 PAK1Q13153 545 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 PPP1R15BQ5SWA1 713 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 HOMER3Q9NSC5 361 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 ABCF3Q9NUQ8 709 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 ZFATQ9P243 1243 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 TRIM33Q9UPN9 1127 aa17.91■□□□□ 0.46
MBD1-204ENST00000347968 HSD17B3P37058 310 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 TAF11Q15544 211 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 FNBP4Q8N3X1 1017 aaPredicted RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 DNAJC7Q99615 494 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 IFIH1Q9BYX4 1025 aaKnown RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 GGA2Q9UJY4 613 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 RNF113AO15541 343 aaKnown RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 BLMHQ13867 455 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 LACTB2Q53H82 288 aaPredicted RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 ANKRD20A2Q5SQ80 823 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 ANKRD20A1Q5TYW2 823 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 ANKRD20A3Q5VUR7 823 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 HYOU1Q9Y4L1 999 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 CTNND1O60716 968 aaKnown RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 FTCDO95954 541 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 DRD4P21917 467 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 FLT3P36888 993 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 PRPHP41219 470 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 MXRA7P84157 204 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 SPA17Q15506 151 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 PI16Q6UXB8 463 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 IRF2BP1Q8IU81 584 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 CCDC42Q96M95 316 aa17.9■□□□□ 0.46
MBD1-204ENST00000347968 ELAC2Q9BQ52 826 aaKnown RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 ZNHIT6Q9NWK9 470 aaKnown RBP17.9■□□□□ 0.46
MBD1-204ENST00000347968 IFIT1P09914 478 aaKnown RBP17.89■□□□□ 0.45
MBD1-204ENST00000347968 ZNF844Q08AG5 666 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms