RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 A0A1W2PRG0 241 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 GPATCH4Q5T3I0 446 aaKnown RBP11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 RSBN1LQ6PCB5 846 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 MAEAQ7L5Y9 396 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 FBXO11Q86XK2 927 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 TBC1D5Q92609 795 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 MED15Q96RN5 788 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 ZNF70Q9UC06 446 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 ASTN2O75129 1339 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 MYH1P12882 1939 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 NPHP3-ACAD11A0A0J9YXS1 232 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 CCDC17Q96LX7 622 aa11.42□□□□□ -0.58
RBFOX1-202ENST00000340209 NAV1Q8NEY1 1877 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 TPM1P09493 284 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 SP4Q02446 784 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 PDXDC2PQ6P474 469 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 TMEM179Q6ZVK1 233 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 ANKS1AQ92625 1134 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 INTS13Q9NVM9 706 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 PCDHA12Q9UN75 941 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 KIAA1024Q9UPX6 916 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 SUGT1Q9Y2Z0 365 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 E9PMD0 336 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 CXCL9Q07325 125 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 CSGALNACT2Q8N6G5 542 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 CYP2W1Q8TAV3 490 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 GSDMAQ96QA5 445 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 POTECB2RU33 542 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 PSMA7O14818 248 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 TPM2P07951 284 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 HMGB2P26583 209 aaKnown RBP11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 PMS1P54277 932 aaKnown RBP11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 PLS1Q14651 629 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 SPATA1Q5VX52 437 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 SV2BQ7L1I2 683 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 LRRC15Q8TF66 581 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 BAG1Q99933 345 aaPredicted RBP11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 ANO3Q9BYT9 981 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
RBFOX1-202ENST00000340209 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 KCNJ18B7U540 433 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 CDC25BP30305 580 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 CASP14P31944 242 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 KCNJ12Q14500 433 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 DALRD3Q5D0E6 543 aaKnown RBP11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 SPECC1LQ69YQ0 1117 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 VSTM4Q8IW00 320 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 ENOX1Q8TC92 643 aaKnown RBP11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 ZNF341Q9BYN7 854 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 RAB34Q9BZG1 259 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 RIOX1Q9H6W3 641 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 ARHGEF10LQ9HCE6 1279 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 SOWAHDA6NJG2 315 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 URI1O94763 535 aaPredicted RBP11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 NAALADL2Q58DX5 795 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 ARL6IP4Q66PJ3 421 aaKnown RBP11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 C4orf32Q8N8J7 132 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 SH2D3AQ9BRG2 576 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 RMND1Q9NWS8 449 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 RBL2Q08999 1139 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 STK4Q13043 487 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 PABPC4Q13310 644 aaKnown RBP eCLIP11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 KRT31Q15323 416 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 E2F4Q16254 413 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 BPIFA3Q9BQP9 254 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 AMNQ9BXJ7 453 aa11.4□□□□□ -0.58
RBFOX1-202ENST00000340209 POTEFA5A3E0 1075 aa11.4□□□□□ -0.59
RBFOX1-202ENST00000340209 POTEIP0CG38 1075 aa11.4□□□□□ -0.59
RBFOX1-202ENST00000340209 POTEGQ6S5H5 508 aa11.4□□□□□ -0.59
RBFOX1-202ENST00000340209 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.59
RBFOX1-202ENST00000340209 KCNK18Q7Z418 384 aa11.4□□□□□ -0.59
RBFOX1-202ENST00000340209 RTKN2Q8IZC4 609 aa11.4□□□□□ -0.59
RBFOX1-202ENST00000340209 GNG11P61952 73 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 RASA3Q14644 834 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 CIAPIN1Q6FI81 312 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 TOGARAM2Q6ZUX3 1019 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 MMRN2Q9H8L6 949 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 PCNTO95613 3336 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 B4DLN1 442 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 FAM237AA0A1B0GTK4 181 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 SARSP49591 514 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 STAT2P52630 851 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 TMED8Q6PL24 325 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 TRIML1Q8N9V2 468 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 LARP4BQ92615 738 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 PPP1R13BQ96KQ4 1090 aa11.39□□□□□ -0.59
RBFOX1-202ENST00000340209 SAMM50Q9Y512 469 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms