RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 VTA1Q9NP79 307 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 Q9Y3F1 56 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 MYO9BQ13459 2157 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 LRRC37A2A6NM11 1700 aa18.46■□□□□ 0.55
LINC01116-202ENST00000339037 ORC4O43929 436 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 NOVP48745 357 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 HS6ST3Q8IZP7 471 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 HERVK_113Q902F9 699 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 TRPV6Q9H1D0 765 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 RANBP17Q9H2T7 1088 aaKnown RBP18.45■□□□□ 0.54
LINC01116-202ENST00000339037 CXXC1Q9P0U4 656 aaPredicted RBP18.45■□□□□ 0.54
LINC01116-202ENST00000339037 MSRAQ9UJ68 235 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 GRIN2DO15399 1336 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 UMODL1Q5DID0 1318 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 SALL3Q9BXA9 1300 aa18.45■□□□□ 0.54
LINC01116-202ENST00000339037 FGBP02675 491 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 RAB30Q15771 203 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 TJAP1Q5JTD0 557 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 KIAA1211Q6ZU35 1233 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 MORC4Q8TE76 937 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 PURBQ96QR8 312 aaKnown RBP18.44■□□□□ 0.54
LINC01116-202ENST00000339037 NOC4LQ9BVI4 516 aaKnown RBP18.44■□□□□ 0.54
LINC01116-202ENST00000339037 PRDM12Q9H4Q4 367 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 TOMM22Q9NS69 142 aa18.44■□□□□ 0.54
LINC01116-202ENST00000339037 ADD3Q9UEY8 706 aaKnown RBP18.44■□□□□ 0.54
LINC01116-202ENST00000339037 NCOR1O75376 2440 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 B4GALT4O60513 344 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 SLC16A2P36021 539 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 CCL23P55773 120 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 PSMC6P62333 389 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 TMEM63BQ5T3F8 832 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 SYDE2Q5VT97 1194 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 TTBK2Q6IQ55 1244 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 OTOP2Q7RTS6 562 aa18.43■□□□□ 0.54
LINC01116-202ENST00000339037 NFIBO00712 420 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 FGRP09769 529 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 TOP1P11387 765 aaKnown RBP18.42■□□□□ 0.54
LINC01116-202ENST00000339037 ALDH5A1P51649 535 aaPredicted RBP18.42■□□□□ 0.54
LINC01116-202ENST00000339037 BAATQ14032 418 aaPredicted RBP18.42■□□□□ 0.54
LINC01116-202ENST00000339037 ALX1Q15699 326 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 DUSP28Q4G0W2 176 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 RRP12Q5JTH9 1297 aaKnown RBP18.42■□□□□ 0.54
LINC01116-202ENST00000339037 BTNL9Q6UXG8 535 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 PPM1EQ8WY54 764 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
LINC01116-202ENST00000339037 LOC102724159A0A0B4J2E5 919 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 PYGBP11216 843 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 PWP2Q15269 919 aaKnown RBP18.41■□□□□ 0.54
LINC01116-202ENST00000339037 AKNAD1Q5T1N1 836 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 ANKRD45Q5TZF3 282 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
LINC01116-202ENST00000339037 CRBNQ96SW2 442 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 TMEM47Q9BQJ4 181 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 WDR11Q9BZH6 1224 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 ALDH8A1Q9H2A2 487 aaPredicted RBP18.41■□□□□ 0.54
LINC01116-202ENST00000339037 SLC28A3Q9HAS3 691 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 PRDM6Q9NQX0 595 aa18.41■□□□□ 0.54
LINC01116-202ENST00000339037 FRMPD2Q68DX3 1309 aaPredicted RBP18.41■□□□□ 0.54
LINC01116-202ENST00000339037 FGAP02671 866 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 CPT1AP50416 773 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 SLC30A10Q6XR72 485 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
LINC01116-202ENST00000339037 FAM227BQ96M60 508 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 NKX2-4Q9H2Z4 354 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 GPCPD1Q9NPB8 672 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 PNMA2Q9UL42 364 aa18.4■□□□□ 0.54
LINC01116-202ENST00000339037 LCTP09848 1927 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 A0A0D9SFI3 127 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 SUPT20HL2P0C7V6 817 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 PDHBP11177 359 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 CALML3P27482 149 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 PURAQ00577 322 aaKnown RBP18.39■□□□□ 0.53
LINC01116-202ENST00000339037 ADGRE1Q14246 886 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 MCMDC2Q4G0Z9 681 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 TCP11L1Q9NUJ3 509 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 TRMT13Q9NUP7 481 aaKnown RBP18.39■□□□□ 0.53
LINC01116-202ENST00000339037 YBX2Q9Y2T7 364 aaKnown RBP18.39■□□□□ 0.53
LINC01116-202ENST00000339037 SLC4A7Q9Y6M7 1214 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
LINC01116-202ENST00000339037 IGFBP4P22692 258 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 PDE1AP54750 535 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 PPP2R5BQ15173 497 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 BRDTQ58F21 947 aaPredicted RBP18.38■□□□□ 0.53
LINC01116-202ENST00000339037 RNF207Q6ZRF8 634 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 ATXN2LQ8WWM7 1075 aaKnown RBP18.38■□□□□ 0.53
LINC01116-202ENST00000339037 CLEC4DQ8WXI8 215 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 SCLYQ96I15 445 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 MPHOSPH6Q99547 160 aaKnown RBP18.38■□□□□ 0.53
LINC01116-202ENST00000339037 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
LINC01116-202ENST00000339037 THEGQ9P2T0 379 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 TNKSO95271 1327 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 RAD50Q92878 1312 aa18.38■□□□□ 0.53
LINC01116-202ENST00000339037 RBM47A0AV96 593 aaKnown RBP18.37■□□□□ 0.53
LINC01116-202ENST00000339037 ZBBXA8MT70 800 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 MYL3P08590 195 aa18.37■□□□□ 0.53
LINC01116-202ENST00000339037 HSPD1P10809 573 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms