RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 PDE6AP16499 860 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 KARSQ15046 597 aaKnown RBP13.39□□□□□ -0.27
FN1-202ENST00000336916 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 TSC1Q92574 1164 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 SERPINB13Q9UIV8 391 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 USP17L21D6R901 530 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ALAS1P13196 640 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 SUCLG2Q96I99 432 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 USP6P35125 1406 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 E9PCH4 1651 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 TSPYL6Q8N831 410 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 FANCBQ8NB91 859 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 TRPV6Q9H1D0 765 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
FN1-202ENST00000336916 RSPH14Q9UHP6 348 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 MAP3K7O43318 606 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 GTPBP6O43824 516 aaPredicted RBP13.39□□□□□ -0.27
FN1-202ENST00000336916 RNF40O75150 1001 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
FN1-202ENST00000336916 KRT40Q6A162 431 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ARMCX2Q7L311 632 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ST7Q9NRC1 585 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 RHOXF2BP0C7M4 288 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ZAP70P43403 619 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 RHOXF2Q9BQY4 288 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 MYO1AQ9UBC5 1043 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 FAN1Q9Y2M0 1017 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 EVI5O60447 810 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ORC2Q13416 577 aaPredicted RBP13.39□□□□□ -0.27
FN1-202ENST00000336916 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
FN1-202ENST00000336916 SSH3Q8TE77 659 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 TTC39CQ8N584 583 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 KIAA1468Q9P260 1216 aa13.39□□□□□ -0.27
FN1-202ENST00000336916 ABCC4O15439 1325 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 PASKQ96RG2 1323 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 ASNSP08243 561 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 MFAP3P55082 362 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 SEMA3FQ13275 785 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 SLFN12LQ6IEE8 588 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 APOBEC3FQ8IUX4 373 aaKnown RBP13.38□□□□□ -0.27
FN1-202ENST00000336916 ZNF594Q96JF6 807 aaPredicted RBP13.38□□□□□ -0.27
FN1-202ENST00000336916 VPS54Q9P1Q0 977 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 PSMD2Q13200 908 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 PHKBQ93100 1093 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 KCNJ18B7U540 433 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 TCP1P17987 556 aaKnown RBP13.38□□□□□ -0.27
FN1-202ENST00000336916 KCNJ12Q14500 433 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
FN1-202ENST00000336916 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 DHTKD1Q96HY7 919 aaPredicted RBP13.38□□□□□ -0.27
FN1-202ENST00000336916 MORC3Q14149 939 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 ARL13BQ3SXY8 428 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 TCP11Q8WWU5 503 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 OGFRQ9NZT2 677 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 ABCC3O15438 1527 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 LRRIQ1Q96JM4 1722 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 A0A1B0GUA9 196 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 FDX1P10109 184 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 HSPA6P17066 643 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
FN1-202ENST00000336916 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
FN1-202ENST00000336916 CCDC124Q96CT7 223 aaKnown RBP13.38□□□□□ -0.27
FN1-202ENST00000336916 GSTA1P08263 222 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 GSTA2P09210 222 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
FN1-202ENST00000336916 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 RGS16O15492 202 aaPredicted RBP13.37□□□□□ -0.27
FN1-202ENST00000336916 ANXA13P27216 316 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 ZNF445P59923 1031 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 APBA1Q02410 837 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 MAEAQ7L5Y9 396 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 INO80BQ9C086 356 aaPredicted RBP13.37□□□□□ -0.27
FN1-202ENST00000336916 SEPT9Q9UHD8 586 aaPredicted RBP13.37□□□□□ -0.27
FN1-202ENST00000336916 STMN1P16949 149 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 CRKLP46109 303 aaKnown RBP13.37□□□□□ -0.27
FN1-202ENST00000336916 RILPQ96NA2 401 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 USTQ9Y2C2 406 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 CCDC88AQ3V6T2 1871 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 BTDP43251 543 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 CTDSPL2Q05D32 466 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 UBE2Q2Q8WVN8 375 aa13.37□□□□□ -0.27
FN1-202ENST00000336916 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms