RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MEIS1O00470 390 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 GNA11P29992 359 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 KRT9P35527 623 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 APBA1Q02410 837 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 ZNF543Q08ER8 600 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 RRP1BQ14684 758 aaKnown RBP9.93□□□□□ -0.82
SNCA-201ENST00000336904 KRT25Q7Z3Z0 450 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 SLF2Q8IX21 1173 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 CSGALNACT2Q8N6G5 542 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 SNX29Q8TEQ0 813 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 TRIM9Q9C026 710 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 AGPAT5Q9NUQ2 364 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 EXOC1Q9NV70 894 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 FAM198AQ9UFP1 575 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 RWDD2AQ9UIY3 292 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 TTC26A0AVF1 554 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 MYMKA6NI61 221 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 RGL2O15211 777 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 CASQ1P31415 396 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 EN1Q05925 392 aaPredicted RBP9.93□□□□□ -0.82
SNCA-201ENST00000336904 GRB10Q13322 594 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 ZNF569Q5MCW4 686 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 ADSSL1Q8N142 457 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 NLGN1Q8N2Q7 840 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 KIAA0895Q8NCT3 520 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 MNS1Q8NEH6 495 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 CDK5RAP3Q96JB5 506 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 P2RX7Q99572 595 aaKnown RBP9.93□□□□□ -0.82
SNCA-201ENST00000336904 SCN9AQ15858 1988 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 ENC1O14682 589 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 SLC1A4P43007 532 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 KCTD19Q17RG1 926 aaPredicted RBP9.93□□□□□ -0.82
SNCA-201ENST00000336904 NELFCDQ8IXH7 590 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 PNMA5Q96PV4 448 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 TRIM34Q9BYJ4 488 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 RIOX1Q9H6W3 641 aa9.93□□□□□ -0.82
SNCA-201ENST00000336904 E9PMD0 336 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 STX10O60499 249 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 HLA-DOAP06340 250 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 PBX1P40424 430 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 ECE1P42892 770 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 ENOX2Q16206 610 aaKnown RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 QRICH1Q2TAL8 776 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 CERKLQ49MI3 558 aaPredicted RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 MIGA2Q7L4E1 593 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 FAM163AQ96GL9 167 aaPredicted RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 MASTLQ96GX5 879 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 PRMT6Q96LA8 375 aaPredicted RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 DUSP9Q99956 384 aaKnown RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 BLOC1S4Q9NUP1 217 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 KBTBD4Q9NVX7 518 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 ZSCAN12O43309 604 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 GH2P01242 217 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 MTIF2P46199 727 aaKnown RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 ELOA2Q8IYF1 753 aaPredicted RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 DAGLBQ8NCG7 672 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 CYP2W1Q8TAV3 490 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 PSTPIP2Q9H939 334 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 ABHD10Q9NUJ1 306 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 ZNF446Q9NWS9 450 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 DDX25Q9UHL0 483 aaKnown RBP9.92□□□□□ -0.82
SNCA-201ENST00000336904 PCDHA1Q9Y5I3 950 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 ADGRG1Q9Y653 693 aa9.92□□□□□ -0.82
SNCA-201ENST00000336904 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 POTECB2RU33 542 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 PLEKP08567 350 aaPredicted RBP9.91□□□□□ -0.82
SNCA-201ENST00000336904 CYP27A1Q02318 531 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 DGKZQ13574 1117 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 SYCP1Q15431 976 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 SLFN13Q68D06 897 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
SNCA-201ENST00000336904 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 FCHSD1Q86WN1 690 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 ERO1AQ96HE7 468 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 CNOT6LQ96LI5 555 aaKnown RBP9.91□□□□□ -0.82
SNCA-201ENST00000336904 GUCA1BQ9UMX6 200 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 COL11A2P13942 1736 aaPredicted RBP9.91□□□□□ -0.82
SNCA-201ENST00000336904 KLRG2A4D1S0 409 aaPredicted RBP9.91□□□□□ -0.82
SNCA-201ENST00000336904 PSMA7O14818 248 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 EPHB6O15197 1021 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 CCDC175P0C221 793 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 PDE6BP35913 854 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 CYP4A11Q02928 519 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 CDC37Q16543 378 aaPredicted RBP9.91□□□□□ -0.82
SNCA-201ENST00000336904 SLC35F6Q8N357 371 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 TBC1D5Q92609 795 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 CALML4Q96GE6 196 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 MAP7D2Q96T17 732 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 SEMA6BQ9H3T3 888 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 VEZTQ9HBM0 779 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 FAM207AQ9NSI2 230 aaPredicted RBP9.91□□□□□ -0.82
SNCA-201ENST00000336904 SLX4Q8IY92 1834 aa9.91□□□□□ -0.82
SNCA-201ENST00000336904 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 YDJCA8MPS7 323 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 H0YIN7 160 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 ALDH1B1P30837 517 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 ICA1Q05084 483 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 CCDC93Q567U6 631 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms