RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 ARHGAP25P42331 645 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 LMAN1P49257 510 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ADCY7P51828 1080 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ANKRD40Q6AI12 368 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 DYMQ7RTS9 669 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CCDC170Q8IYT3 715 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ANKZF1Q9H8Y5 726 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 NHEJ1Q9H9Q4 299 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PDE11AQ9HCR9 933 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ABCB6Q9NP58 842 aa13.05□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 M0R2N6 131 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 AKR1B10O60218 316 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 GRIK5Q16478 980 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 C7orf25Q9BPX7 421 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 AGPAT5Q9NUQ2 364 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 VPS18Q9P253 973 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TAF1P21675 1872 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 G3V3G9 751 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FCER1AP12319 257 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CACNA2D4Q7Z3S7 1137 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 COL4A1P02462 1669 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CCDC84Q86UT8 332 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MSANTD4Q8NCY6 345 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SNX29Q8TEQ0 813 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PNKPQ96T60 521 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TSGA10Q9BZW7 698 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 COL16A1Q07092 1604 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ROBO3Q96MS0 1386 aa13.04□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 USP17L5A8MUK1 530 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 NAP1L1P55209 391 aaKnown RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 LEKR1Q6ZMV7 388 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 NEK11Q8NG66 645 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 LARP4BQ92615 738 aaKnown RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 FLT1P17948 1338 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MYH13Q9UKX3 1938 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 VSNL1P62760 191 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ZNF507Q8TCN5 953 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RPGRIP1Q96KN7 1286 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 STK17AQ9UEE5 414 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 PSMD14O00487 310 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TACC1O75410 805 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 GPSM2P81274 684 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 BEND6Q5SZJ8 279 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 LRRC47Q8N1G4 583 aaKnown RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 CWC15Q9P013 229 aaKnown RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 RAB21Q9UL25 225 aa13.03□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 F8W031 263 aaPredicted RBP13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 hCG_1984214I3L0E3 225 aa13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 TOM1O60784 492 aa13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 ZNF713Q8N859 430 aaPredicted RBP13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 COA7Q96BR5 231 aa13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 DUSP9Q99956 384 aaKnown RBP13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 HDAC6Q9UBN7 1215 aa13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 LAMB2P55268 1798 aa13.02□□□□□ -0.32
CSPG4P4Y-201ENST00000333235 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CYP27A1Q02318 531 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SLC35G1Q2M3R5 365 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ASPRV1Q53RT3 343 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 NOA1Q8NC60 698 aaKnown RBP13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 HPS3Q969F9 1004 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ALS2CR12Q96Q35 445 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TMEM260Q9NX78 707 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CCDC181Q5TID7 509 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ADAM21Q9UKJ8 722 aa13.02□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 EIF3CLB5ME19 914 aaKnown RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 PHACTR2O75167 634 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 CASP8Q14790 479 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 VPS72Q15906 364 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 DRC1Q96MC2 740 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 EIF3CQ99613 913 aaKnown RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 TFR2Q9UP52 801 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 ERCC3P19447 782 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 EPS15P42566 896 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 KLK7P49862 253 aa13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
CSPG4P4Y-201ENST00000333235 GYS2P54840 703 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms