RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ASIC1P78348 528 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 GUCY2DQ02846 1103 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 FAM153CQ494X1 144 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 TDRD12Q587J7 1177 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 RPGRIP1Q96KN7 1286 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 TANGO6Q9C0B7 1094 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 PPANQ9NQ55 473 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 PRDM11Q9NQV5 511 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 FAM153AQ9UHL3 310 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 PACSIN2Q9UNF0 486 aaPredicted RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 WDR17Q8IZU2 1322 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 PRPF3O43395 683 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 SHOX2O60902 331 aaPredicted RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 BMP15O95972 392 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 CARSP49589 748 aaKnown RBP8.76□□□□□ -1.01
VMA21-201ENST00000330374 RASSF7Q02833 373 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 SEC23AQ15436 765 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 TRADDQ15628 312 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 CFAP58Q5T655 872 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 RRAGAQ7L523 313 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 OSBPL9Q96SU4 736 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 YY1AP1Q9H869 796 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 EPB41L5Q9HCM4 733 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 RTL9Q8NET4 1388 aa8.76□□□□□ -1.01
VMA21-201ENST00000330374 MAGEB6P1A0A0J9YX57 407 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 EPHB6O15197 1021 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 IFT88Q13099 833 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 INF2Q27J81 1249 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 ANKRD40Q6AI12 368 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 AMOTL1Q8IY63 956 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 PBXIP1Q96AQ6 731 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 RNPC3Q96LT9 517 aaKnown RBP8.75□□□□□ -1.01
VMA21-201ENST00000330374 PCDHA13Q9Y5I0 950 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 RASSF10A6NK89 507 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 GOLGA8KD6RF30 607 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 VAV2P52735 878 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 NPY5RQ15761 445 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 DTHD1Q6ZMT9 781 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 ZNF507Q8TCN5 953 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 TMEM60Q9H2L4 133 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 NLRC4Q9NPP4 1024 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 DISC1Q9NRI5 854 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 STIM2Q9P246 746 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 MYH7P12883 1935 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 SLIT3O75094 1523 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 AKAP11Q9UKA4 1901 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 ZBED6P86452 979 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 ACTN3Q08043 901 aaPredicted RBP8.75□□□□□ -1.01
VMA21-201ENST00000330374 SLC39A2Q9NP94 309 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 FAM205AQ6ZU69 1335 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 CCDC194A0A1B0GVG4 234 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 USP17L21D6R901 530 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 FTCDO95954 541 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 CPP00450 1065 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 EEF1GP26641 437 aaKnown RBP8.75□□□□□ -1.01
VMA21-201ENST00000330374 MAGEA1P43355 309 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 GYG1P46976 350 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 KIF11P52732 1056 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 FUT2Q10981 343 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 HLTFQ14527 1009 aaKnown RBP eCLIP8.75□□□□□ -1.01
VMA21-201ENST00000330374 EP400NLQ6ZTU2 488 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 KLHL7Q8IXQ5 586 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 CXorf56Q9H5V9 222 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 SPEF2Q9C093 1822 aa8.75□□□□□ -1.01
VMA21-201ENST00000330374 PDS5AQ29RF7 1337 aaKnown RBP8.75□□□□□ -1.01
VMA21-201ENST00000330374 MYH6P13533 1939 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 E7EVH7 732 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 SRGNP10124 158 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 SCG2P13521 617 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 GFPT1Q06210 699 aaPredicted RBP8.74□□□□□ -1.01
VMA21-201ENST00000330374 STK4Q13043 487 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 HAUS3Q68CZ6 603 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 SUGP1Q8IWZ8 645 aaKnown RBP8.74□□□□□ -1.01
VMA21-201ENST00000330374 TRIM58Q8NG06 486 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 UIMC1Q96RL1 719 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 SALL4Q9UJQ4 1053 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 HEXIM1O94992 359 aaKnown RBP8.74□□□□□ -1.01
VMA21-201ENST00000330374 GLI1P08151 1106 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 EPHB4P54760 987 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 KCNA1Q09470 495 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 TMTC3Q6ZXV5 915 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 CEP57Q86XR8 500 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 POTEDQ86YR6 584 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 ALS2CR12Q96Q35 445 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
VMA21-201ENST00000330374 CPVLQ9H3G5 476 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 PCDH11XQ9BZA7 1347 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 PCDH11YQ9BZA8 1340 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 HMGB1P1B2RPK0 211 aaPredicted RBP8.74□□□□□ -1.01
VMA21-201ENST00000330374 IRF6O14896 467 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 ATF3P18847 181 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 GNAT2P19087 354 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 TROAPQ12815 778 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 HIC1Q14526 733 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 NAALADL2Q58DX5 795 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 OR2W6PQ8NHA6 318 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 KRT12Q99456 494 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 KANSL2Q9H9L4 492 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms