RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PURAQ00577 322 aaKnown RBP17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 CNKSR3Q6P9H4 555 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 RPAINQ86UA6 219 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 FAM133AQ8N9E0 248 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 CHST13Q8NET6 341 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 DYNLL2Q96FJ2 89 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 NSUN3Q9H649 340 aaKnown RBP17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 PDGFCQ9NRA1 345 aa17.83■□□□□ 0.44
CTHRC1-201ENST00000330295 TPRP12270 2363 aaKnown RBP17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 MED19A0JLT2 244 aaPredicted RBP17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 RGS20O76081 388 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 CYP2D6P10635 497 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 G3BP1Q13283 466 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 GPNMBQ14956 572 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 CLUL1Q15846 466 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 NBPF20Q3BBV1 942 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 TAPT1Q6NXT6 567 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 FAM117BQ6P1L5 589 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 CCDC17Q96LX7 622 aa17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 RAVER2Q9HCJ3 691 aaKnown RBP17.82■□□□□ 0.44
CTHRC1-201ENST00000330295 NCK2O43639 380 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 ZBED4O75132 1171 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 SMAD4Q13485 552 aaKnown RBP17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 EPC2Q52LR7 807 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 TNNI3KQ59H18 835 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 NFRKBQ6P4R8 1299 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 FBXO16Q8IX29 292 aaPredicted RBP17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 PRPF38AQ8NAV1 312 aaKnown RBP17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 AFAP1L1Q8TED9 768 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 MTG1Q9BT17 334 aaPredicted RBP17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 CRNKL1Q9BZJ0 848 aaKnown RBP17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 INSL6Q9Y581 213 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 FPGT-TNNI3KV9GXZ4 949 aa17.81■□□□□ 0.44
CTHRC1-201ENST00000330295 ABHD14A-ACY1A0A1B0GW23 586 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 MYL3P08590 195 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 NBL1P41271 181 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 SIGLEC14Q08ET2 396 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 CTC1Q2NKJ3 1217 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 TMED8Q6PL24 325 aaPredicted RBP17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 EEPD1Q7L9B9 569 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 PPP1R13LQ8WUF5 828 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 SAMD11Q96NU1 681 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 GPR108Q9NPR9 543 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 NOD1Q9Y239 953 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 DDX49Q9Y6V7 483 aaKnown RBP17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 NCOR2Q9Y618 2525 aa17.8■□□□□ 0.44
CTHRC1-201ENST00000330295 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 H3BNC9 293 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 EFCAB14O75071 495 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 NUBP1P53384 320 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 DLX2Q07687 328 aaPredicted RBP17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 GPM6BQ13491 265 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 TCTN1Q2MV58 587 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 CAGE1Q8TC20 777 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 SLC38A10Q9HBR0 1119 aa17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 DCP1AQ9NPI6 582 aaPredicted RBP17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
CTHRC1-201ENST00000330295 USP17L12C9JPN9 530 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 USP17L21D6R901 530 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 CXCL10P02778 98 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 CPT1AP50416 773 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 SLFN5Q08AF3 891 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 DUSP28Q4G0W2 176 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 CCDC155Q8N6L0 562 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 SDR42E1Q8WUS8 393 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 ASIC4Q96FT7 647 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 HOMER2Q9NSB8 354 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 COG6Q9Y2V7 657 aa17.78■□□□□ 0.44
CTHRC1-201ENST00000330295 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 KDM4AO75164 1064 aa17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 SELPP16109 830 aa17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 OAZ1P54368 228 aa17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 LRRC8DQ7L1W4 858 aa17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 SP7Q8TDD2 431 aaPredicted RBP17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 KIFC2Q96AC6 838 aa17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 ACAD9Q9H845 621 aa17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 A1CFQ9NQ94 594 aaKnown RBP17.77■□□□□ 0.44
CTHRC1-201ENST00000330295 ZFHX4Q86UP3 3567 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 ATG2AQ2TAZ0 1938 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 BAHCC1Q9P281 2608 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 NBNO60934 754 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 CDK8P49336 464 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 HTRA4P83105 476 aaPredicted RBP17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 IKBKEQ14164 716 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 ADSSL1Q8N142 457 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 CNTNAP3BQ96NU0 1288 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 CNTNAP3Q9BZ76 1288 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 ANTXR1Q9H6X2 564 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 VTA1Q9NP79 307 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 DNAH14Q0VDD8 3507 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 MICAL3Q7RTP6 2002 aa17.76■□□□□ 0.43
CTHRC1-201ENST00000330295 LOC730098B7Z3J9 87 aa17.75■□□□□ 0.43
CTHRC1-201ENST00000330295 TBX10O75333 385 aa17.75■□□□□ 0.43
CTHRC1-201ENST00000330295 PTGISQ16647 500 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms