RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ENC1O14682 589 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 GSTO1P78417 241 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 TBC1D8BQ0IIM8 1120 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 DIXDC1Q155Q3 683 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 ZNF662Q6ZS27 426 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 RETREG2Q8NC44 543 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 TTYH3Q9C0H2 523 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 ZNHIT6Q9NWK9 470 aaKnown RBP17.18■□□□□ 0.34
BRCC3-201ENST00000330045 PSD3Q9NYI0 1048 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 UTRNP46939 3433 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 NAV1Q8NEY1 1877 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 CCNT1O60563 726 aaKnown RBP17.18■□□□□ 0.34
BRCC3-201ENST00000330045 RASA1P20936 1047 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 CYLC1P35663 651 aaPredicted RBP17.18■□□□□ 0.34
BRCC3-201ENST00000330045 NAPAP54920 295 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 GRIK5Q16478 980 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 ANKRD40Q6AI12 368 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 WDR93Q6P2C0 686 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 KRT25Q7Z3Z0 450 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 KIAA1328Q86T90 577 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 EEF2KMTQ96G04 330 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 TFR2Q9UP52 801 aa17.18■□□□□ 0.34
BRCC3-201ENST00000330045 KRT86O43790 486 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 PPP4CP60510 307 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 CASP8Q14790 479 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 NONOQ15233 471 aaKnown RBP eCLIP17.17■□□□□ 0.34
BRCC3-201ENST00000330045 FAM114A1Q8IWE2 563 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 SPZ1Q9BXG8 430 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 HDAC6Q9UBN7 1215 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 SAR1BQ9Y6B6 198 aa17.17■□□□□ 0.34
BRCC3-201ENST00000330045 ATP1A1P05023 1023 aaKnown RBP17.16■□□□□ 0.34
BRCC3-201ENST00000330045 ASIC1P78348 528 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 STK4Q13043 487 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 EHBP1Q8NDI1 1231 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 CNOT6LQ96LI5 555 aaKnown RBP17.16■□□□□ 0.34
BRCC3-201ENST00000330045 CPVLQ9H3G5 476 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 SAP30BPQ9UHR5 308 aaKnown RBP17.16■□□□□ 0.34
BRCC3-201ENST00000330045 SMCO2A6NFE2 343 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 RASSF10A6NK89 507 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 PPP1R2P41236 205 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
BRCC3-201ENST00000330045 ZBED6P86452 979 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 PAPD7Q5XG87 772 aaKnown RBP17.16■□□□□ 0.34
BRCC3-201ENST00000330045 MAPKAPK5Q8IW41 473 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 CCDC170Q8IYT3 715 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 NHEJ1Q9H9Q4 299 aaPredicted RBP17.16■□□□□ 0.34
BRCC3-201ENST00000330045 ZNF287Q9HBT7 754 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 C6orf50Q9HD87 102 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 VPS18Q9P253 973 aa17.16■□□□□ 0.34
BRCC3-201ENST00000330045 IPO7O95373 1038 aaKnown RBP17.15■□□□□ 0.34
BRCC3-201ENST00000330045 LDHCP07864 332 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 GNA11P29992 359 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 KLK7P49862 253 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 AMPD3Q01432 767 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 NEK8Q86SG6 692 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 PCMTD1Q96MG8 357 aaPredicted RBP17.15■□□□□ 0.34
BRCC3-201ENST00000330045 NOC4LQ9BVI4 516 aaKnown RBP17.15■□□□□ 0.34
BRCC3-201ENST00000330045 EIF3CLB5ME19 914 aaKnown RBP17.15■□□□□ 0.34
BRCC3-201ENST00000330045 FCER1AP12319 257 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 TECP42680 631 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 LMAN1P49257 510 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
BRCC3-201ENST00000330045 EIF3CQ99613 913 aaKnown RBP17.15■□□□□ 0.34
BRCC3-201ENST00000330045 LEMD3Q9Y2U8 911 aa17.15■□□□□ 0.34
BRCC3-201ENST00000330045 N4BP1O75113 896 aaKnown RBP17.14■□□□□ 0.34
BRCC3-201ENST00000330045 USP14P54578 494 aa17.14■□□□□ 0.34
BRCC3-201ENST00000330045 EZH2Q15910 746 aaKnown RBP17.14■□□□□ 0.34
BRCC3-201ENST00000330045 MMS19Q96T76 1030 aa17.14■□□□□ 0.34
BRCC3-201ENST00000330045 SRGAP2O75044 1071 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 MMP10P09238 476 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 MUM1L1Q5H9M0 696 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 MIIPQ5JXC2 388 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 SOGA3Q5TF21 947 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 CNNM4Q6P4Q7 775 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 RRP36Q96EU6 259 aaKnown RBP17.14■□□□□ 0.33
BRCC3-201ENST00000330045 EYA3Q99504 573 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 LACRTQ9GZZ8 138 aa17.14■□□□□ 0.33
BRCC3-201ENST00000330045 RCCD1A6NED2 376 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 CDK8P49336 464 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 FIGNQ5HY92 759 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 USP17L2Q6R6M4 530 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 ZSCAN29Q8IWY8 852 aaPredicted RBP17.13■□□□□ 0.33
BRCC3-201ENST00000330045 ZBTB9Q96C00 473 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 CALML4Q96GE6 196 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
BRCC3-201ENST00000330045 SEC63Q9UGP8 760 aaKnown RBP17.13■□□□□ 0.33
BRCC3-201ENST00000330045 CDK5RAP2Q96SN8 1893 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 A0A1W2PQJ5 194 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 UFL1O94874 794 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 ZSCAN26Q16670 478 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 FKBP15Q5T1M5 1219 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 TBCKQ8TEA7 893 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 RPGRIP1Q96KN7 1286 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms