RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 ZSCAN29Q8IWY8 852 aaPredicted RBP22.23■■□□□ 1.15
SOX2-201ENST00000325404 TMEM47Q9BQJ4 181 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 TUBGCP2Q9BSJ2 902 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 TNS1Q9HBL0 1735 aaKnown RBP22.23■■□□□ 1.15
SOX2-201ENST00000325404 ZCCHC17Q9NP64 241 aaKnown RBP22.23■■□□□ 1.15
SOX2-201ENST00000325404 RGS17Q9UGC6 210 aaPredicted RBP22.23■■□□□ 1.15
SOX2-201ENST00000325404 PP2D1A8MPX8 630 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 MMP10P09238 476 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 CSGALNACT2Q8N6G5 542 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 SH3RF3Q8TEJ3 882 aaPredicted RBP22.23■■□□□ 1.15
SOX2-201ENST00000325404 TRIM9Q9C026 710 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 ZNHIT6Q9NWK9 470 aaKnown RBP22.23■■□□□ 1.15
SOX2-201ENST00000325404 EIF3CLB5ME19 914 aaKnown RBP22.22■■□□□ 1.15
SOX2-201ENST00000325404 PPEF1O14829 653 aaPredicted RBP22.22■■□□□ 1.15
SOX2-201ENST00000325404 KRT86O43790 486 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 GNA11P29992 359 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 HERVK_113P62684 666 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 DYNLL2Q96FJ2 89 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 ERGIC2Q96RQ1 377 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 EIF3CQ99613 913 aaKnown RBP22.22■■□□□ 1.15
SOX2-201ENST00000325404 GUCA1BQ9UMX6 200 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 H3BQF6 201 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 NONOQ15233 471 aaKnown RBP eCLIP22.22■■□□□ 1.15
SOX2-201ENST00000325404 POTEAQ6S8J7 498 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 C6orf50Q9HD87 102 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 ADAM21Q9UKJ8 722 aa22.22■■□□□ 1.15
SOX2-201ENST00000325404 USP17L3A6NCW0 530 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 USP17L4A6NCW7 530 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 RASA1P20936 1047 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 VSNL1P62760 191 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 USP17L1Q7RTZ2 530 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 ACBD3Q9H3P7 528 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 VIPAS39Q9H9C1 493 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 CD209Q9NNX6 404 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 NRXN2Q9P2S2 1712 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 ANO9A1A5B4 782 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 TARSL2A2RTX5 802 aaKnown RBP22.21■■□□□ 1.15
SOX2-201ENST00000325404 PLCG1P19174 1290 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 SP8Q8IXZ3 490 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 TBC1D16Q8TBP0 767 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 SAR1BQ9Y6B6 198 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 RGPD3A6NKT7 1758 aaPredicted RBP22.21■■□□□ 1.15
SOX2-201ENST00000325404 RGPD4Q7Z3J3 1758 aa22.21■■□□□ 1.15
SOX2-201ENST00000325404 ESYT2A0FGR8 921 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 NPR1P16066 1061 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 CKAP4Q07065 602 aaKnown RBP22.2■■□□□ 1.14
SOX2-201ENST00000325404 CCDC122Q5T0U0 273 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 ANKRD31Q8N7Z5 1873 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 NAV1Q8NEY1 1877 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 KLRF2D3W0D1 207 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 hCG_1984214I3L0E3 225 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 RHOXF2BP0C7M4 288 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 PDE6BP35913 854 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 USP14P54578 494 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 HNRNPH2P55795 449 aaKnown RBP22.2■■□□□ 1.14
SOX2-201ENST00000325404 TBC1D8BQ0IIM8 1120 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 CNNM4Q6P4Q7 775 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 ZNF713Q8N859 430 aaPredicted RBP22.2■■□□□ 1.14
SOX2-201ENST00000325404 LRRC15Q8TF66 581 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 PURBQ96QR8 312 aaKnown RBP22.2■■□□□ 1.14
SOX2-201ENST00000325404 RHOXF2Q9BQY4 288 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 PDE11AQ9HCR9 933 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 POLLQ9UGP5 575 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 ABCB11O95342 1321 aa22.2■■□□□ 1.14
SOX2-201ENST00000325404 NOA1Q8NC60 698 aaKnown RBP22.19■■□□□ 1.14
SOX2-201ENST00000325404 NEDD1Q8NHV4 660 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 B4DLN1 442 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 C6orf229H3BNL8 230 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 IPO7O95373 1038 aaKnown RBP22.19■■□□□ 1.14
SOX2-201ENST00000325404 IL1R1P14778 569 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 HNRNPH3P31942 346 aaKnown RBP22.19■■□□□ 1.14
SOX2-201ENST00000325404 NOVP48745 357 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 PDE4DQ08499 809 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 CASP8Q14790 479 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 NEK8Q86SG6 692 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 ATP6V0A2Q9Y487 856 aa22.19■■□□□ 1.14
SOX2-201ENST00000325404 RASSF10A6NK89 507 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 TRIM21P19474 475 aaKnown RBP22.18■■□□□ 1.14
SOX2-201ENST00000325404 NAPAP54920 295 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 MCM6Q14566 821 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 MSL1Q68DK7 614 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 ANKRD40Q6AI12 368 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 FOXR2Q6PJQ5 311 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 C16orf86Q6ZW13 317 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 CNOT6LQ96LI5 555 aaKnown RBP22.18■■□□□ 1.14
SOX2-201ENST00000325404 TSGA10Q9BZW7 698 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 MED4Q9NPJ6 270 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 KIAA1328Q86T90 577 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 FAM71BQ8TC56 605 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 JAKMIP2Q96AA8 810 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 RRP36Q96EU6 259 aaKnown RBP22.18■■□□□ 1.14
SOX2-201ENST00000325404 MYH1P12882 1939 aa22.18■■□□□ 1.14
SOX2-201ENST00000325404 LRRC37AA6NMS7 1700 aa22.17■■□□□ 1.14
SOX2-201ENST00000325404 MAP9Q49MG5 647 aa22.17■■□□□ 1.14
SOX2-201ENST00000325404 NCAPH2Q6IBW4 605 aa22.17■■□□□ 1.14
SOX2-201ENST00000325404 TGFBRAP1Q8WUH2 860 aa22.17■■□□□ 1.14
SOX2-201ENST00000325404 NHEJ1Q9H9Q4 299 aaPredicted RBP22.17■■□□□ 1.14
SOX2-201ENST00000325404 STX8Q9UNK0 236 aa22.17■■□□□ 1.14
SOX2-201ENST00000325404 PVALEFA0A1B0GWK0 134 aa22.17■■□□□ 1.14
SOX2-201ENST00000325404 SMCO2A6NFE2 343 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms