RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PAIP2Q9BPZ3 127 aaKnown RBP16.87■□□□□ 0.29
VARS2-201ENST00000321897 KIAA1024Q9UPX6 916 aa16.87■□□□□ 0.29
VARS2-201ENST00000321897 H3BQF6 201 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 VIMP08670 466 aaKnown RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 PRCPP42785 496 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 ARHGAP44Q17R89 818 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 NAA35Q5VZE5 725 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 KCNB2Q92953 911 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 MRFAP1Q9Y605 127 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 GSTTP1A0A1W2PQM5 241 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 CCDC25Q86WR0 208 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 KIFC2Q96AC6 838 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 PSTPIP2Q9H939 334 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 MRPL44Q9H9J2 332 aaKnown RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 PRPF3O43395 683 aaKnown RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 SASH3O75995 380 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 GCNT3O95395 438 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 POLR2FP61218 127 aaKnown RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 GPBP1Q86WP2 473 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 BUB1BO60566 1050 aaPredicted RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 TMEM47Q9BQJ4 181 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 MXD3Q9BW11 206 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 FBXO2Q9UK22 296 aaPredicted RBP16.86■□□□□ 0.29
VARS2-201ENST00000321897 PCDHA4Q9UN74 947 aa16.86■□□□□ 0.29
VARS2-201ENST00000321897 TCHHQ07283 1943 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 TCP10L2B9ZVM9 353 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 GGCXP38435 758 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 ALDH8A1Q9H2A2 487 aaPredicted RBP16.85■□□□□ 0.29
VARS2-201ENST00000321897 TRIM10Q9UDY6 481 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
VARS2-201ENST00000321897 PCDHA1Q9Y5I3 950 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 AGLP35573 1532 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 SFI1A8K8P3 1242 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 USP17L5A8MUK1 530 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 DDAH1O94760 285 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 SERPINB2P05120 415 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 RASSF7Q02833 373 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 SGMS1Q86VZ5 419 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 BICD1Q96G01 975 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 GCKP35557 465 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 ARFGAP2Q8N6H7 521 aa16.85■□□□□ 0.29
VARS2-201ENST00000321897 UHMK1Q8TAS1 419 aaKnown RBP16.85■□□□□ 0.29
VARS2-201ENST00000321897 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
VARS2-201ENST00000321897 PXDNLA1KZ92 1463 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 KLHL30Q0D2K2 578 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 TRIML1Q8N9V2 468 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 RSRC1Q96IZ7 334 aaKnown RBP16.84■□□□□ 0.29
VARS2-201ENST00000321897 CHP1Q99653 195 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 L2HGDHQ9H9P8 463 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 CEP104O60308 925 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 ERCC5P28715 1186 aaPredicted RBP16.84■□□□□ 0.29
VARS2-201ENST00000321897 ARHGAP25P42331 645 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 CDK8P49336 464 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 EARS2Q5JPH6 523 aaKnown RBP16.84■□□□□ 0.29
VARS2-201ENST00000321897 FOXP4Q8IVH2 680 aaPredicted RBP16.84■□□□□ 0.29
VARS2-201ENST00000321897 LSM14BQ9BX40 385 aaKnown RBP16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L15C9J2P7 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L13C9JLJ4 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L11C9JVI0 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L18D6R9N7 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L22D6RA61 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L17D6RBQ6 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L19D6RCP7 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L20D6RJB6 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L24Q0WX57 530 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 USP17L6PQ6QN14 398 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 KRT26Q7Z3Y9 468 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 N4BP2L2Q92802 583 aaPredicted RBP16.84■□□□□ 0.29
VARS2-201ENST00000321897 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
VARS2-201ENST00000321897 FCER1AP12319 257 aa16.83■□□□□ 0.29
VARS2-201ENST00000321897 VEGFAP15692 232 aaPredicted RBP16.83■□□□□ 0.29
VARS2-201ENST00000321897 HOXA13P31271 388 aaPredicted RBP16.83■□□□□ 0.29
VARS2-201ENST00000321897 CYP2J2P51589 502 aa16.83■□□□□ 0.29
VARS2-201ENST00000321897 PPP1R7Q15435 360 aa16.83■□□□□ 0.29
VARS2-201ENST00000321897 SEPT7Q16181 437 aaKnown RBP16.83■□□□□ 0.29
VARS2-201ENST00000321897 TXNRD1Q16881 649 aa16.83■□□□□ 0.29
VARS2-201ENST00000321897 BCS1LQ9Y276 419 aa16.83■□□□□ 0.29
VARS2-201ENST00000321897 CETN3O15182 167 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 CLTAP09496 248 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 TUBB2AQ13885 445 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 TUBB2BQ9BVA1 445 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 ODF2LQ9ULJ1 636 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 EIF4E1BA6NMX2 242 aaKnown RBP16.83■□□□□ 0.28
VARS2-201ENST00000321897 H7C1D1 291 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 CLIC2O15247 247 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 FXR1P51114 621 aaKnown RBP eCLIP16.83■□□□□ 0.28
VARS2-201ENST00000321897 TNIP1Q15025 636 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
VARS2-201ENST00000321897 MYCT1Q8N699 235 aa16.83■□□□□ 0.28
VARS2-201ENST00000321897 MYCLP12524 364 aaPredicted RBP16.82■□□□□ 0.28
VARS2-201ENST00000321897 SARNPP82979 210 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms