RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 GOLGA1Q92805 767 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 ZNF512BQ96KM6 892 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.45
TOP3A-201ENST00000321105 EIF2AK2P19525 551 aaKnown RBP12.21□□□□□ -0.45
TOP3A-201ENST00000321105 TOB1P50616 345 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-201ENST00000321105 ADAM9Q13443 819 aa12.21□□□□□ -0.45
TOP3A-201ENST00000321105 BMS1Q14692 1282 aaKnown RBP12.21□□□□□ -0.45
TOP3A-201ENST00000321105 KRT31Q15323 416 aa12.21□□□□□ -0.45
TOP3A-201ENST00000321105 LEKR1Q6ZMV7 388 aa12.21□□□□□ -0.45
TOP3A-201ENST00000321105 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.45
TOP3A-201ENST00000321105 GOLGA6L10A6NI86 522 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 IKBKBO14920 756 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 TRAPPC10P48553 1259 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 BIRC3Q13489 604 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 NTRK3Q16288 839 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 TMTC1Q8IUR5 882 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 TXLNBQ8N3L3 684 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 ENGASEQ8NFI3 743 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 ENOX1Q8TC92 643 aaKnown RBP12.21□□□□□ -0.46
TOP3A-201ENST00000321105 TRIM31Q9BZY9 425 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 BHMT2Q9H2M3 363 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 GCOM1H8Y6P7 765 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-201ENST00000321105 POLR2MP0CAP2 368 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.46
TOP3A-201ENST00000321105 CDC42EP5Q6NZY7 148 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 TRIML1Q8N9V2 468 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 NEDD1Q8NHV4 660 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 ERO1AQ96HE7 468 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 ZNF341Q9BYN7 854 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 SH2D4AQ9H788 454 aa12.21□□□□□ -0.46
TOP3A-201ENST00000321105 H7C1D1 291 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 ADRA2BP18089 450 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 CXCR5P32302 372 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 KLHL30Q0D2K2 578 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 LRCH2Q5VUJ6 765 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 PODNQ7Z5L7 613 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 ADAT2Q7Z6V5 191 aaKnown RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 FAM217BQ9NTX9 383 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 DCCP43146 1447 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 POTECB2RU33 542 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 ORC4O43929 436 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 EPB41P11171 864 aaKnown RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 LSM14BQ9BX40 385 aaKnown RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 IFIH1Q9BYX4 1025 aaKnown RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 BARHL2Q9NY43 387 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 FRMD4BQ9Y2L6 1034 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 RPL13P26373 211 aaKnown RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 SF3A3Q12874 501 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■■■□ 21.4
TOP3A-201ENST00000321105 TRAF1Q13077 416 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
TOP3A-201ENST00000321105 MAATS1Q7Z4T9 603 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 VSTM4Q8IW00 320 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 TSPYL1Q9H0U9 437 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 PCIF1Q9H4Z3 704 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 PCDHAC2Q9Y5I4 1007 aa12.2□□□□□ -0.46
TOP3A-201ENST00000321105 SMIM23A6NLE4 172 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-201ENST00000321105 STAT2P52630 851 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 EZH2Q15910 746 aaKnown RBP12.19□□□□□ -0.46
TOP3A-201ENST00000321105 TOGARAM2Q6ZUX3 1019 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 ANO3Q9BYT9 981 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 MTMR4Q9NYA4 1195 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 EPN1Q9Y6I3 576 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-201ENST00000321105 STK36Q9NRP7 1315 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 PNMA6FA0A0J9YX94 578 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
TOP3A-201ENST00000321105 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 ARMCX5Q6P1M9 558 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 FAM178BQ8IXR5 827 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 SP8Q8IXZ3 490 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 SLC35F6Q8N357 371 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 TBC1D5Q92609 795 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 DDX12PQ92771 950 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 PHF20Q9BVI0 1012 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 ATP6V0A2Q9Y487 856 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 CNTNAP4Q9C0A0 1308 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 KRT5P13647 590 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 NR2F2P24468 414 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 GRM4Q14833 912 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 ODR4Q5SWX8 454 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 ZNF658Q5TYW1 1059 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-201ENST00000321105 MIER3Q7Z3K6 550 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 P2RX5Q93086 422 aa12.19□□□□□ -0.46
TOP3A-201ENST00000321105 WDR19Q8NEZ3 1342 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 FAM102BQ5T8I3 360 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 SWAP70Q9UH65 585 aa12.18□□□□□ -0.46
TOP3A-201ENST00000321105 PCDHA6Q9UN73 950 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms