RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 CCDC63Q8NA47 563 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 STMN4Q9H169 189 aaPredicted RBP16.98■□□□□ 0.31
GCFC2-201ENST00000321027 CPVLQ9H3G5 476 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 MTUS1Q9ULD2 1270 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 FLOT1O75955 427 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
GCFC2-201ENST00000321027 CASP8Q14790 479 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 FAM26FQ5R3K3 315 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 ENGASEQ8NFI3 743 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 GOLGA5Q8TBA6 731 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 PPANQ9NQ55 473 aaKnown RBP16.98■□□□□ 0.31
GCFC2-201ENST00000321027 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 CYP2D6P10635 497 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 BIRC3Q13489 604 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 DLGAP5Q15398 846 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 ENAHQ8N8S7 591 aaPredicted RBP16.98■□□□□ 0.31
GCFC2-201ENST00000321027 STAG1Q8WVM7 1258 aa16.98■□□□□ 0.31
GCFC2-201ENST00000321027 FAM205CA6NFA0 338 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 ANKRD65E5RJM6 399 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 VIMP08670 466 aaKnown RBP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 GRAPQ13588 217 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 ARHGAP44Q17R89 818 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 TCP11X2Q5H9J9 407 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 USP17L2Q6R6M4 530 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 FLAD1Q8NFF5 587 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 TSNARE1Q96NA8 513 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 RNF40O75150 1001 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 GUCY2DQ02846 1103 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 CEP85LQ5SZL2 805 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 SMCR8Q8TEV9 937 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 PPM1EQ8WY54 764 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 ANKRD7Q92527 254 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 LRRC45Q96CN5 670 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 MYO1AQ9UBC5 1043 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 MORC2Q9Y6X9 1032 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 PPEF1O14829 653 aaPredicted RBP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 SRGAP2O75044 1071 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 KRT71Q3SY84 523 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 ADAT2Q7Z6V5 191 aaKnown RBP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 TBCKQ8TEA7 893 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 SH2D4AQ9H788 454 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.31
GCFC2-201ENST00000321027 CPXCR1Q8N123 301 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 ADAM21Q9UKJ8 722 aa16.97■□□□□ 0.31
GCFC2-201ENST00000321027 DDX39AO00148 427 aaKnown RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 PLCG1P19174 1290 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 LIG3P49916 1009 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 C2orf54Q08AI8 447 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 KCNB2Q92953 911 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 PSTPIP2Q9H939 334 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 UTP11Q9Y3A2 253 aaKnown RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 ADGRG1Q9Y653 693 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 E7EVH7 732 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 CFBP00751 764 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 CCT5P48643 541 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 MARCH10Q8NA82 808 aaPredicted RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 U2AF1L4Q8WU68 220 aaKnown RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 NAP1L4Q99733 375 aaKnown RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 PANK4Q9NVE7 773 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 CTTNBP2NLQ9P2B4 639 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 ARMCX3Q9UH62 379 aaPredicted RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 MYOM1P52179 1685 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 CPDO75976 1380 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 UTYO14607 1347 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 PRR16Q569H4 304 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 PAXIP1Q6ZW49 1069 aaPredicted RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 SGMS1Q86VZ5 419 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 DHTKD1Q96HY7 919 aaPredicted RBP16.96■□□□□ 0.31
GCFC2-201ENST00000321027 CABS1Q96KC9 395 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 SAMD15Q9P1V8 674 aa16.96■□□□□ 0.31
GCFC2-201ENST00000321027 RIMS1Q86UR5 1692 aaKnown RBP16.96■□□□□ 0.3
GCFC2-201ENST00000321027 CYP4A11Q02928 519 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 GLT8D2Q9H1C3 349 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 TSKSQ9UJT2 592 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 CALUO43852 315 aaPredicted RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 EXOC3O60645 756 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 XRCC5P13010 732 aaKnown RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 IRX5P78411 483 aaPredicted RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 ADAM9Q13443 819 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 SUPT20HQ8NEM7 779 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 MRRFQ96E11 262 aaKnown RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 CAPS2Q9BXY5 557 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 NT5C3AQ9H0P0 336 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 ADGRB2O60241 1585 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 NHEJ1Q9H9Q4 299 aaPredicted RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 UBE2Q2LH0YL09 131 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 CTIFO43310 598 aaKnown RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 KRT5P13647 590 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 ARL1P40616 181 aaPredicted RBP16.95■□□□□ 0.3
GCFC2-201ENST00000321027 NAA35Q5VZE5 725 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 GALNT17Q6IS24 598 aa16.95■□□□□ 0.3
GCFC2-201ENST00000321027 TPH2Q8IWU9 490 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms