RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 HNRNPH2P55795 449 aaKnown RBP14.91□□□□□ -0.02
CLCN6-201ENST00000312413 DHX9Q08211 1270 aaKnown RBP14.91□□□□□ -0.02
CLCN6-201ENST00000312413 PPP2R5AQ15172 486 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 TFCP2L1Q9NZI6 479 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 ADCY9O60503 1353 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 TNKSO95271 1327 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 USP17L12C9JPN9 530 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 USP17L21D6R901 530 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 K7ENM7 598 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 MAP3K7O43318 606 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 SCRN1Q12765 414 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 ABTB1Q969K4 478 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-201ENST00000312413 HDAC11Q96DB2 347 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 NR1D1P20393 614 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 FAM102BQ5T8I3 360 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 FNBP4Q8N3X1 1017 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-201ENST00000312413 SPTLC3Q9NUV7 552 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 SAT1P21673 171 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 LIG4P49917 911 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 C2orf54Q08AI8 447 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 EAF2Q96CJ1 260 aaPredicted RBP14.91□□□□□ -0.02
CLCN6-201ENST00000312413 EFHD1Q9BUP0 239 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 NOD1Q9Y239 953 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 ADAMTS12P58397 1594 aa14.91□□□□□ -0.02
CLCN6-201ENST00000312413 CUEDC2Q9H467 287 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 PSTPIP2Q9H939 334 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 POLR3EQ9NVU0 708 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 BLMP54132 1417 aaPredicted RBP14.9□□□□□ -0.02
CLCN6-201ENST00000312413 RINT1Q6NUQ1 792 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 DHTKD1Q96HY7 919 aaPredicted RBP14.9□□□□□ -0.02
CLCN6-201ENST00000312413 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
CLCN6-201ENST00000312413 H7C0C1 242 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 ATP5OP48047 213 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 PNMA6AP0CW24 399 aaPredicted RBP14.9□□□□□ -0.02
CLCN6-201ENST00000312413 ADCY1Q08828 1119 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 FBXO38Q6PIJ6 1188 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 EEF2KMTQ96G04 330 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 CCDC68Q9H2F9 335 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
CLCN6-201ENST00000312413 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 H0YCG3 227 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 ARMCX5Q6P1M9 558 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 MAP7D3Q8IWC1 876 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 GPHNQ9NQX3 736 aaPredicted RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 TRPM2O94759 1503 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 ARHGEF12Q9NZN5 1544 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 ASXL2Q76L83 1435 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 GNPATO15228 680 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 ECEL1O95672 775 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 ECE1P42892 770 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 ANGPTL2Q9UKU9 493 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 A1BGP04217 495 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 BPIFB4P59827 614 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 STX1BP61266 288 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 TERF2Q15554 542 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 RSBN1LQ6PCB5 846 aaPredicted RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 PNMA1Q8ND90 353 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 CCDC127Q96BQ5 260 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 SEPT10Q9P0V9 454 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 NOVA2Q9UNW9 492 aaKnown RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 CAPN9O14815 690 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 PFDN6O15212 129 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 TNNC2P02585 160 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 FGAP02671 866 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 HSPA6P17066 643 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 MAGEA9P43362 315 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 PTK2Q05397 1052 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 SLMAPQ14BN4 828 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 MMS22LQ6ZRQ5 1243 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 SCINQ9Y6U3 715 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 NEURL1BA8MQ27 555 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 TRPA1O75762 1119 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 ECM2O94769 699 aaPredicted RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 TMED2Q15363 201 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 CYP4F22Q6NT55 531 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 GJA10Q969M2 543 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 PBKQ96KB5 322 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 CCDC138Q96M89 665 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 LSG1Q9H089 658 aaKnown RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 SLC52A2Q9HAB3 445 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 HESX1Q9UBX0 185 aa14.89□□□□□ -0.03
CLCN6-201ENST00000312413 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.89□□□□□ -0.03
CLCN6-201ENST00000312413 KDRP35968 1356 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 SGK1O00141 431 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 DDAH1O94760 285 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 DLATP10515 647 aaKnown RBP14.88□□□□□ -0.03
CLCN6-201ENST00000312413 EIF3BP55884 814 aaKnown RBP14.88□□□□□ -0.03
CLCN6-201ENST00000312413 PLCB4Q15147 1175 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 ACRBPQ8NEB7 543 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 NEK9Q8TD19 979 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 DDX25Q9UHL0 483 aaKnown RBP14.88□□□□□ -0.03
CLCN6-201ENST00000312413 ITSN2Q9NZM3 1697 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 MYO1CO00159 1063 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 MSH2P43246 934 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms