RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TDP2O95551 362 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 SLURP2P0DP57 97 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 TRAPPC3LQ5T215 181 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 NEDD1Q8NHV4 660 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 JAKMIP2Q96AA8 810 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 SBF2Q86WG5 1849 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 ZNF185O15231 689 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 SLC37A4O43826 429 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 ZMYND10O75800 440 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 HNRNPH2P55795 449 aaKnown RBP28.31■■■□□ 2.12
HOXB3-201ENST00000311626 ATP2B2Q01814 1243 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 MFSD14BQ5SR56 506 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 SMCR8Q8TEV9 937 aaPredicted RBP28.31■■■□□ 2.12
HOXB3-201ENST00000311626 NUDT12Q9BQG2 462 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 TTYH3Q9C0H2 523 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 GPCPD1Q9NPB8 672 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 LAD1O00515 517 aa28.31■■■□□ 2.12
HOXB3-201ENST00000311626 POTEMA6NI47 508 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 EPHB6O15197 1021 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 TRAPPC11Q7Z392 1133 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 REXO1Q8N1G1 1221 aaKnown RBP28.3■■■□□ 2.12
HOXB3-201ENST00000311626 GLIS3Q8NEA6 775 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 RPGRQ92834 1020 aaKnown RBP28.3■■■□□ 2.12
HOXB3-201ENST00000311626 C7orf25Q9BPX7 421 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 DNAJC5Q9H3Z4 198 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 MYO1AQ9UBC5 1043 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 L1RE1Q9UN81 338 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 MYMKA6NI61 221 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 GNA11P29992 359 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 RHBDL3P58872 404 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 GRB10Q13322 594 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 GDAP1L1Q96MZ0 367 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 LZTS2Q9BRK4 669 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 HAUS4Q9H6D7 363 aa28.3■■■□□ 2.12
HOXB3-201ENST00000311626 PHACTR2O75167 634 aa28.29■■■□□ 2.12
HOXB3-201ENST00000311626 LRRC41Q15345 812 aa28.29■■■□□ 2.12
HOXB3-201ENST00000311626 VPS18Q9P253 973 aa28.29■■■□□ 2.12
HOXB3-201ENST00000311626 NAV1Q8NEY1 1877 aa28.29■■■□□ 2.12
HOXB3-201ENST00000311626 GPR75-ASB3A0A0A6YYF3 556 aa28.29■■■□□ 2.12
HOXB3-201ENST00000311626 HDXQ7Z353 690 aa28.29■■■□□ 2.12
HOXB3-201ENST00000311626 BLOC1S4Q9NUP1 217 aa28.29■■■□□ 2.12
HOXB3-201ENST00000311626 CCDC66A2RUB6 948 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 EDIL3O43854 480 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 IDEP14735 1019 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 TUBB2AQ13885 445 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 PRR5LQ6MZQ0 368 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 CCDC47Q96A33 483 aaKnown RBP28.28■■■□□ 2.12
HOXB3-201ENST00000311626 AK8Q96MA6 479 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 TUBB2BQ9BVA1 445 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 FAM207AQ9NSI2 230 aaPredicted RBP28.28■■■□□ 2.12
HOXB3-201ENST00000311626 ADAM21Q9UKJ8 722 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 MYL1P05976 194 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 TMED8Q6PL24 325 aaPredicted RBP28.28■■■□□ 2.12
HOXB3-201ENST00000311626 CALML4Q96GE6 196 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 PNMA5Q96PV4 448 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 ZNHIT6Q9NWK9 470 aaKnown RBP28.28■■■□□ 2.12
HOXB3-201ENST00000311626 LRWD1Q9UFC0 647 aa28.28■■■□□ 2.12
HOXB3-201ENST00000311626 UBE2SQ16763 222 aa28.27■■■□□ 2.12
HOXB3-201ENST00000311626 HNRNPLLQ8WVV9 542 aaKnown RBP28.27■■■□□ 2.12
HOXB3-201ENST00000311626 DRC1Q96MC2 740 aa28.27■■■□□ 2.12
HOXB3-201ENST00000311626 ZNF263O14978 683 aa28.27■■■□□ 2.12
HOXB3-201ENST00000311626 CALCRLQ16602 461 aa28.27■■■□□ 2.12
HOXB3-201ENST00000311626 MEA1Q16626 185 aa28.27■■■□□ 2.12
HOXB3-201ENST00000311626 KCNK18Q7Z418 384 aa28.27■■■□□ 2.12
HOXB3-201ENST00000311626 SAR1BQ9Y6B6 198 aa28.27■■■□□ 2.12
HOXB3-201ENST00000311626 BICDL2A1A5D9 508 aa28.26■■■□□ 2.12
HOXB3-201ENST00000311626 POTEB2H3BUK9 544 aa28.26■■■□□ 2.12
HOXB3-201ENST00000311626 PSMD14O00487 310 aa28.26■■■□□ 2.12
HOXB3-201ENST00000311626 ERLIN1O75477 346 aa28.26■■■□□ 2.12
HOXB3-201ENST00000311626 ZNF287Q9HBT7 754 aa28.26■■■□□ 2.12
HOXB3-201ENST00000311626 POLLQ9UGP5 575 aa28.26■■■□□ 2.12
HOXB3-201ENST00000311626 MYH1P12882 1939 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 COL24A1Q17RW2 1714 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 DDX60LQ5H9U9 1706 aaKnown RBP28.26■■■□□ 2.11
HOXB3-201ENST00000311626 LRRIQ3A6PVS8 624 aaPredicted RBP28.26■■■□□ 2.11
HOXB3-201ENST00000311626 RIMBP2O15034 1052 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 LMAN1P49257 510 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 CASP8Q14790 479 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 SV2BQ7L1I2 683 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 CCDC155Q8N6L0 562 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 CUEDC2Q9H467 287 aa28.26■■■□□ 2.11
HOXB3-201ENST00000311626 ZBTB22O15209 634 aa28.25■■■□□ 2.11
HOXB3-201ENST00000311626 PDHBP11177 359 aa28.25■■■□□ 2.11
HOXB3-201ENST00000311626 ZBED6P86452 979 aa28.25■■■□□ 2.11
HOXB3-201ENST00000311626 GSPT2Q8IYD1 628 aaKnown RBP28.25■■■□□ 2.11
HOXB3-201ENST00000311626 NOC3LQ8WTT2 800 aaKnown RBP28.25■■■□□ 2.11
HOXB3-201ENST00000311626 GGA1Q9UJY5 639 aa28.25■■■□□ 2.11
HOXB3-201ENST00000311626 AKR1B1P15121 316 aa28.25■■■□□ 2.11
HOXB3-201ENST00000311626 CYLC1P35663 651 aaPredicted RBP28.25■■■□□ 2.11
HOXB3-201ENST00000311626 TNNI2P48788 182 aa28.25■■■□□ 2.11
HOXB3-201ENST00000311626 C6orf229H3BNL8 230 aa28.24■■■□□ 2.11
HOXB3-201ENST00000311626 PDE2AO00408 941 aaPredicted RBP28.24■■■□□ 2.11
HOXB3-201ENST00000311626 KRT83P78385 493 aa28.24■■■□□ 2.11
HOXB3-201ENST00000311626 MRPS25P82663 173 aaKnown RBP28.24■■■□□ 2.11
HOXB3-201ENST00000311626 MXD3Q9BW11 206 aa28.24■■■□□ 2.11
HOXB3-201ENST00000311626 FAN1Q9Y2M0 1017 aa28.24■■■□□ 2.11
HOXB3-201ENST00000311626 GOLGB1Q14789 3259 aaKnown RBP28.24■■■□□ 2.11
HOXB3-201ENST00000311626 TTBK2Q6IQ55 1244 aa28.24■■■□□ 2.11
HOXB3-201ENST00000311626 DPP8Q6V1X1 898 aaPredicted RBP28.24■■■□□ 2.11
HOXB3-201ENST00000311626 CCDC102AQ96A19 550 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms