RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CXCL9Q07325 125 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 UBE2SQ16763 222 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 CCDC112Q8NEF3 446 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 STAMQ92783 540 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 CCDC47Q96A33 483 aaKnown RBP21.87■■□□□ 1.09
HOXC4-201ENST00000303406 PRIMPOLQ96LW4 560 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 MBOAT7Q96N66 472 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 MMTAG2Q9BU76 263 aaKnown RBP21.87■■□□□ 1.09
HOXC4-201ENST00000303406 TAOK3Q9H2K8 898 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 CYP3A7-CYP3A51PA0A087WV96 503 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 A0A1B0GTH6 734 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 SLC37A4O43826 429 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 KLRC4O43908 158 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 PLA2G6O60733 806 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 TDP2O95551 362 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 CYP3A7P24462 503 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 SPAG1Q07617 926 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 ARID5BQ14865 1188 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 DNTTIP2Q5QJE6 756 aaKnown RBP21.86■■□□□ 1.09
HOXC4-201ENST00000303406 ARMCX5Q6P1M9 558 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 INTS13Q9NVM9 706 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 LRWD1Q9UFC0 647 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 ZBTB21Q9ULJ3 1066 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 ZBTB12Q9Y330 459 aaPredicted RBP21.86■■□□□ 1.09
HOXC4-201ENST00000303406 R3HCC1Q9Y3T6 440 aaKnown RBP21.86■■□□□ 1.09
HOXC4-201ENST00000303406 LTBP3Q9NS15 1303 aa21.86■■□□□ 1.09
HOXC4-201ENST00000303406 FOSP01100 380 aaPredicted RBP21.85■■□□□ 1.09
HOXC4-201ENST00000303406 RPS12P25398 132 aaKnown RBP21.85■■□□□ 1.09
HOXC4-201ENST00000303406 PAK1Q13153 545 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 TNIP1Q15025 636 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 FBXO11Q86XK2 927 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 SH2D4AQ9H788 454 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 GOPCQ9HD26 462 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 SAMSN1Q9NSI8 373 aaKnown RBP21.85■■□□□ 1.09
HOXC4-201ENST00000303406 PGAP2Q9UHJ9 254 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 DDX25Q9UHL0 483 aaKnown RBP21.85■■□□□ 1.09
HOXC4-201ENST00000303406 A0A1W2PRG0 241 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 TXKP42681 527 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 TBX2Q13207 712 aaPredicted RBP21.85■■□□□ 1.09
HOXC4-201ENST00000303406 NR1I3Q14994 352 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 COBLL1Q53SF7 1204 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 JDP2Q8WYK2 163 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 ANO3Q9BYT9 981 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 LRRC27Q9C0I9 530 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 MYH7BA7E2Y1 1941 aa21.85■■□□□ 1.09
HOXC4-201ENST00000303406 TMEM232C9JQI7 657 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 RAD21O60216 631 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 ZNF280AP59817 542 aaPredicted RBP21.84■■□□□ 1.09
HOXC4-201ENST00000303406 STIM1Q13586 685 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 KMT5BQ4FZB7 885 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 KLHL10Q6JEL2 608 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 CNNM4Q6P4Q7 775 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 APTXQ7Z2E3 356 aaKnown RBP21.84■■□□□ 1.09
HOXC4-201ENST00000303406 ADSSL1Q8N142 457 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 GIMAP8Q8ND71 665 aaPredicted RBP21.84■■□□□ 1.09
HOXC4-201ENST00000303406 LRRC15Q8TF66 581 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 CRYGNQ8WXF5 182 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 TRIM9Q9C026 710 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 GINM1Q9NU53 330 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 CTNND2Q9UQB3 1225 aa21.84■■□□□ 1.09
HOXC4-201ENST00000303406 MEIS2O14770 477 aa21.83■■□□□ 1.09
HOXC4-201ENST00000303406 SPECC1LQ69YQ0 1117 aa21.83■■□□□ 1.09
HOXC4-201ENST00000303406 SMYD4Q8IYR2 804 aaPredicted RBP21.83■■□□□ 1.09
HOXC4-201ENST00000303406 VEZTQ9HBM0 779 aa21.83■■□□□ 1.09
HOXC4-201ENST00000303406 LIMA1Q9UHB6 759 aaKnown RBP21.83■■□□□ 1.09
HOXC4-201ENST00000303406 LRRC10BA6NIK2 292 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 H7C1D1 291 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 ZBTB7AO95365 584 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 GRB10Q13322 594 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 FILIP1LQ4L180 1135 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 TMEM119Q4V9L6 283 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 HYIQ5T013 277 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 KRT79Q5XKE5 535 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 NELFBQ8WX92 580 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 PNMA5Q96PV4 448 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 TMX1Q9H3N1 280 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 MYOZ2Q9NPC6 264 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 CD2APQ9Y5K6 639 aa21.82■■□□□ 1.08
HOXC4-201ENST00000303406 PSDA5PKW4 1024 aaPredicted RBP21.81■■□□□ 1.08
HOXC4-201ENST00000303406 PIK3CDO00329 1044 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 WNT10BO00744 389 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 TBX3O15119 743 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 CAP2P40123 477 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 STAT2P52630 851 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 STX17P56962 302 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 TPD52L1Q16890 204 aaPredicted RBP21.81■■□□□ 1.08
HOXC4-201ENST00000303406 NOC3LQ8WTT2 800 aaKnown RBP21.81■■□□□ 1.08
HOXC4-201ENST00000303406 HAS1Q92839 578 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 DHTKD1Q96HY7 919 aaPredicted RBP21.81■■□□□ 1.08
HOXC4-201ENST00000303406 NUP88Q99567 741 aaPredicted RBP21.81■■□□□ 1.08
HOXC4-201ENST00000303406 VCPKMTQ9H867 229 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 KCNMB3Q9NPA1 279 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 PRR12Q9ULL5 1215 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 KDM3AQ9Y4C1 1321 aa21.81■■□□□ 1.08
HOXC4-201ENST00000303406 PVALEFA0A1B0GWK0 134 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 PRCPP42785 496 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 IKQ13123 557 aaPredicted RBP21.8■■□□□ 1.08
HOXC4-201ENST00000303406 SV2BQ7L1I2 683 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 FAM160B2Q86V87 743 aa21.8■■□□□ 1.08
HOXC4-201ENST00000303406 SLFN12Q8IYM2 578 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms