RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 GSTA2P09210 222 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 TTC19Q6DKK2 380 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 SDCCAG8Q86SQ7 713 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 HACD3Q9P035 362 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 G3BP2Q9UN86 482 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 CUTAO60888 179 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 CYP26C1Q6V0L0 522 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 PEX26Q7Z412 305 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 OR6B3Q8NGW1 331 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 HSPH1Q92598 858 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 HEXIM2Q96MH2 286 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 NAP1L3Q99457 506 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 RBSNQ9H1K0 784 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 ARFGAP3Q9NP61 516 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 NFE2L3Q9Y4A8 694 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 RIPOR2Q9Y4F9 1068 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 HSPA4P34932 840 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 ACCSLQ4AC99 568 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 OR6B2Q6IFH4 312 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 RWDD4Q6NW29 188 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 TBCKQ8TEA7 893 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 USP44Q9H0E7 712 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 RAD50Q92878 1312 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 PDE6CP51160 858 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 NLRP12P59046 1061 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 SPP2Q13103 211 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 EZH2Q15910 746 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 DCAF4L1Q3SXM0 396 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 HP1BP3Q5SSJ5 553 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 C8orf74Q6P047 294 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 DENND3A2RUS2 1198 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 SGSM2O43147 1006 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 SCG2P13521 617 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 CC2D2BQ6DHV5 1058 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 BRINP3Q76B58 766 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 SPATA24Q86W54 205 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 PIH1D3Q9NQM4 214 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 C1orf112Q9NSG2 853 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 TXNDC9O14530 226 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 CYP2B6P20813 491 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 COPB2P35606 906 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 BRD3Q15059 726 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 TRIP13Q15645 432 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 ZNF589Q86UQ0 364 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 SLC44A5Q8NCS7 719 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 TSGA10Q9BZW7 698 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 ARAP3Q8WWN8 1544 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 GPSM2P81274 684 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 RPS6KA2Q15349 733 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 HABP4Q5JVS0 413 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 SLC38A10Q9HBR0 1119 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 OR52Z1P0C646 297 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 ECE1P42892 770 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 C1orf228Q6PIY5 440 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 GPR161Q8N6U8 529 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 TRIM56Q9BRZ2 755 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 GPBP1L1Q9HC44 474 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 XRCC5P13010 732 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 HHATQ5VTY9 493 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 ARHGEF2Q92974 986 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 SH2D3AQ9BRG2 576 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 EDC4Q6P2E9 1401 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 PALLDQ8WX93 1383 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 ABCB11O95342 1321 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 RNF207Q6ZRF8 634 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 NLRP10Q86W26 655 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 KRT12Q99456 494 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 ANAPC5Q9UJX4 755 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 OPA1O60313 960 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 PEX3P56589 373 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 CYFIP1Q7L576 1253 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 AIFM3Q96NN9 605 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 CSRNP2Q9H175 543 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 CACYBPQ9HB71 228 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 CPSF3Q9UKF6 684 aaKnown RBP8.55□□□□□ -1.04
SCN9A-201ENST00000303354 TMEM2Q9UHN6 1383 aa8.55□□□□□ -1.04
SCN9A-201ENST00000303354 A6NJR5 290 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 SGK1O00141 431 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 MYL7Q01449 175 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 TXNRD1Q16881 649 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 INTS8Q75QN2 995 aaKnown RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 LEMD3Q9Y2U8 911 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 CAPN2P17655 700 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 ADCY8P40145 1251 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 NCAPGQ9BPX3 1015 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 DNAJC17Q9NVM6 304 aaKnown RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 IRF1P10914 325 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 NPR1P16066 1061 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 EVCP57679 992 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 MORC3Q14149 939 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 HDAC11Q96DB2 347 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 GCNAQ96QF7 691 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 NKIRAS1Q9NYS0 192 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 NPHP4O75161 1426 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 DPYSL4O14531 572 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms